Literature DB >> 19368335

Factors controlling the reactivity of hydrogen sulfide with hemeproteins.

Ruth Pietri1, Ariel Lewis, Ruth G León, Gullermina Casabona, Laurent Kiger, Syun-Ru Yeh, Sebastian Fernandez-Alberti, Michael C Marden, Carmen L Cadilla, Juan López-Garriga.   

Abstract

Hemoglobin I (HbI) from the clam Lucina pectinata is an intriguing hemeprotein that binds and transports H(2)S to sulfide-oxidizing chemoautotrophic bacteria to maintain a symbiotic relationship and to protect the mollusk from H(2)S toxicity. Single point mutations at E7, B10, and E11 were introduced into the HbI heme pocket to define the reactivity of sulfide with hemeproteins. The functional and structural properties of mutant and wild-type recombinant proteins were first evaluated using the well-known ferrous CO and O(2) derivatives. The effects of these mutations on the ferric environment were then studied in the metaquo and hydrogen sulfide derivatives. The results obtained with the ferrous HbI mutants show that all the E7 substitutions and the PheB10Tyr mutation influence directly CO and O(2) binding and stability while the B10 and E11 substitutions induce distal structural rearrangements that affect ligand entry and escape indirectly. For the metaquo-GlnE7His, -PheB10Val, -PheB10Leu, and -E11 variants, two individual distal structures are suggested, one of which is associated with H-bonding interactions between the E7 residues and the bound water. Similar H-bonding interactions are invoked for these HbI-H(2)S mutant derivatives and the rHbI, altering in turn sulfide reactivity within these protein samples. This is evident in the resonance Raman spectra of these HbI-H(2)S complexes, which show reduction of heme iron as judged by the appearance of the nu(4) oxidation state marker at 1356 cm(-1), indicative of heme-Fe(II) species. This reduction process depends strongly on distal mutations showing faster reduction for those HbI mutants exhibiting the strongest H-bonding interactions. Overall, the results presented here show that (a) H(2)S association is regulated by external kinetic barriers, (b) H(2)S release is controlled by two competing reactions involving simple sulfide dissociation and heme reduction, (c) at high H(2)S concentrations, reduction of the ferric center dominates, and (d) reduction of the heme is also enhanced in those HbI mutants having polar distal environments.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19368335      PMCID: PMC2715280          DOI: 10.1021/bi801738j

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  39 in total

Review 1.  Modeling heme proteins using atomistic simulations.

Authors:  Damián E Bikiel; Leonardo Boechi; Luciana Capece; Alejandro Crespo; Pablo M De Biase; Santiago Di Lella; Mariano C González Lebrero; Marcelo A Martí; Alejandro D Nadra; Laura L Perissinotti; Damián A Scherlis; Darío A Estrin
Journal:  Phys Chem Chem Phys       Date:  2006-10-11       Impact factor: 3.676

2.  Hemoglobins of the Lucina pectinata/bacteria symbiosis. I. Molecular properties, kinetics and equilibria of reactions with ligands.

Authors:  D W Kraus; J B Wittenberg
Journal:  J Biol Chem       Date:  1990-09-25       Impact factor: 5.157

Review 3.  Hydrogen sulfide (H2S) - the third gas of interest for pharmacologists.

Authors:  Ewelina Łowicka; Jerzy Bełtowski
Journal:  Pharmacol Rep       Date:  2007 Jan-Feb       Impact factor: 3.024

4.  Oxidation of sulphide by cytochrome aa3.

Authors:  P Nicholls; J K Kim
Journal:  Biochim Biophys Acta       Date:  1981-09-14

5.  Sulfide-binding hemoglobins: Effects of mutations on active-site flexibility.

Authors:  S Fernandez-Alberti; D E Bacelo; R C Binning; J Echave; M Chergui; J Lopez-Garriga
Journal:  Biophys J       Date:  2006-06-16       Impact factor: 4.033

6.  Hemoglobin I from Lucina pectinata: a model for distal heme-ligand control.

Authors:  Ruth Pietri; Ruth G León; Laurent Kiger; Michael C Marden; Laura B Granell; Carmen L Cadilla; Juan López-Garriga
Journal:  Biochim Biophys Acta       Date:  2005-12-12

7.  Interactions of sulphide and other ligands with cytochrome c oxidase. An electron-paramagnetic-resonance study.

Authors:  B C Hill; T C Woon; P Nicholls; J Peterson; C Greenwood; A J Thomson
Journal:  Biochem J       Date:  1984-12-01       Impact factor: 3.857

8.  Neuroglobin dynamics observed with ultrafast 2D-IR vibrational echo spectroscopy.

Authors:  Haruto Ishikawa; Ilya J Finkelstein; Seongheun Kim; Kyungwon Kwak; Jean K Chung; Keisuke Wakasugi; Aaron M Massari; Michael D Fayer
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-04       Impact factor: 11.205

9.  Hydrogen-bonding conformations of tyrosine B10 tailor the hemeprotein reactivity of ferryl species.

Authors:  Walleska De Jesús-Bonilla; Anthony Cruz; Ariel Lewis; José Cerda; Daniel E Bacelo; Carmen L Cadilla; Juan López-Garriga
Journal:  J Biol Inorg Chem       Date:  2006-02-09       Impact factor: 3.358

10.  Resonance Raman studies of iron spin and axial coordination in distal pocket mutants of ferric myoglobin.

Authors:  D Morikis; P M Champion; B A Springer; K D Egebey; S G Sligar
Journal:  J Biol Chem       Date:  1990-07-25       Impact factor: 5.157

View more
  34 in total

1.  Measurement of plasma hydrogen sulfide in vivo and in vitro.

Authors:  Xinggui Shen; Christopher B Pattillo; Sibile Pardue; Shyamal C Bir; Rui Wang; Christopher G Kevil
Journal:  Free Radic Biol Med       Date:  2011-01-27       Impact factor: 7.376

Review 2.  Interactions of multiple gas-transducing systems: hallmarks and uncertainties of CO, NO, and H2S gas biology.

Authors:  Mayumi Kajimura; Ryo Fukuda; Ryon M Bateman; Takehiro Yamamoto; Makoto Suematsu
Journal:  Antioxid Redox Signal       Date:  2010-07-15       Impact factor: 8.401

3.  Tyrosine B10 triggers a heme propionate hydrogen bonding network loop with glutamine E7 moiety.

Authors:  Brenda J Ramos-Santana; Juan López-Garriga
Journal:  Biochem Biophys Res Commun       Date:  2012-07-15       Impact factor: 3.575

4.  Redox biochemistry of hydrogen sulfide.

Authors:  Omer Kabil; Ruma Banerjee
Journal:  J Biol Chem       Date:  2010-05-06       Impact factor: 5.157

5.  Molecular Cloning and Characterization of a (Lys)6-Tagged Sulfide-Reactive Hemoglobin I from Lucina pectinata.

Authors:  Ramonita Díaz-Ayala; Andrés Moya-Rodríguez; Ruth Pietri; Carmen L Cadilla; Juan López-Garriga
Journal:  Mol Biotechnol       Date:  2015-12       Impact factor: 2.695

Review 6.  Redox chemistry and chemical biology of H2S, hydropersulfides, and derived species: implications of their possible biological activity and utility.

Authors:  Katsuhiko Ono; Takaaki Akaike; Tomohiro Sawa; Yoshito Kumagai; David A Wink; Dean J Tantillo; Adrian J Hobbs; Peter Nagy; Ming Xian; Joseph Lin; Jon M Fukuto
Journal:  Free Radic Biol Med       Date:  2014-09-16       Impact factor: 7.376

Review 7.  Hydrogen sulfide and hemeproteins: knowledge and mysteries.

Authors:  Ruth Pietri; Elddie Román-Morales; Juan López-Garriga
Journal:  Antioxid Redox Signal       Date:  2011-04-08       Impact factor: 8.401

Review 8.  H2S and its role in redox signaling.

Authors:  Omer Kabil; Nicole Motl; Ruma Banerjee
Journal:  Biochim Biophys Acta       Date:  2014-01-11

9.  Sulfide oxidation by a noncanonical pathway in red blood cells generates thiosulfate and polysulfides.

Authors:  Victor Vitvitsky; Pramod K Yadav; Angelika Kurthen; Ruma Banerjee
Journal:  J Biol Chem       Date:  2015-02-16       Impact factor: 5.157

Review 10.  Chemical Biology of H2S Signaling through Persulfidation.

Authors:  Milos R Filipovic; Jasmina Zivanovic; Beatriz Alvarez; Ruma Banerjee
Journal:  Chem Rev       Date:  2017-11-07       Impact factor: 60.622

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.