Literature DB >> 16373495

Virus-like particles of the Ty3 retrotransposon assemble in association with P-body components.

Nadejda Beliakova-Bethell1, Carla Beckham, Thomas H Giddings, Mark Winey, Roy Parker, Suzanne Sandmeyer.   

Abstract

Retroviruses and retrotransposons assemble intracellular immature core particles around a RNA genome, and nascent particles collect in association with membranes or as intracellular clusters. How and where genomic RNA are identified for retrovirus and retrotransposon assembly, and how translation and assembly processes are coordinated is poorly understood. To understand this process, the subcellular localization of Ty3 RNA and capsid proteins and virus-like particles was investigated. We demonstrate that mRNAs, proteins, and virus-like particles of the yeast Ty3 retrotransposon accumulate in association with cytoplasmic P-bodies, which are sites of mRNA translation repression, storage, and degradation. Deletions of genes encoding P-body proteins decreased Ty3 transposition and caused changes in the pattern of Ty3 foci, underscoring the biological significance of the association of Ty3 virus-like protein components and P-bodies. These results suggest the hypothesis that P-bodies may serve to segregate translation and assembly functions of the Ty3 genomic RNA to promote assembly of virus-like particles. Because Ty3 has features of a simple retrovirus and P-body functions are conserved between yeast and metazoan organisms, these findings may provide insights into host factors that facilitate retrovirus assembly.

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Year:  2006        PMID: 16373495      PMCID: PMC1370889          DOI: 10.1261/rna.2264806

Source DB:  PubMed          Journal:  RNA        ISSN: 1355-8382            Impact factor:   4.942


  31 in total

1.  Using rapid freeze and freeze-substitution for the preparation of yeast cells for electron microscopy and three-dimensional analysis.

Authors:  T H Giddings; E T O'Toole; M Morphew; D N Mastronarde; J R McIntosh; M Winey
Journal:  Methods Cell Biol       Date:  2001       Impact factor: 1.441

Review 2.  Destiny of unspliced retroviral RNA: ribosome and/or virion?

Authors:  Melinda Butsch; Kathleen Boris-Lawrie
Journal:  J Virol       Date:  2002-04       Impact factor: 5.103

3.  Identification of a human decapping complex associated with hUpf proteins in nonsense-mediated decay.

Authors:  Jens Lykke-Andersen
Journal:  Mol Cell Biol       Date:  2002-12       Impact factor: 4.272

4.  Decapping and decay of messenger RNA occur in cytoplasmic processing bodies.

Authors:  Ujwal Sheth; Roy Parker
Journal:  Science       Date:  2003-05-02       Impact factor: 47.728

5.  Retroviral genomic RNAs are transported to the plasma membrane by endosomal vesicles.

Authors:  Eugenia Basyuk; Thierry Galli; Marylène Mougel; Jean-Marie Blanchard; Marc Sitbon; Edouard Bertrand
Journal:  Dev Cell       Date:  2003-07       Impact factor: 12.270

6.  A long terminal repeat-containing retrotransposon of Schizosaccharomyces pombe expresses a Gag-like protein that assembles into virus-like particles which mediate reverse transcription.

Authors:  Laure Teysset; Van-Dinh Dang; Min Kyung Kim; Henry L Levin
Journal:  J Virol       Date:  2003-05       Impact factor: 5.103

7.  Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis.

Authors:  E A Winzeler; D D Shoemaker; A Astromoff; H Liang; K Anderson; B Andre; R Bangham; R Benito; J D Boeke; H Bussey; A M Chu; C Connelly; K Davis; F Dietrich; S W Dow; M El Bakkoury; F Foury; S H Friend; E Gentalen; G Giaever; J H Hegemann; T Jones; M Laub; H Liao; N Liebundguth; D J Lockhart; A Lucau-Danila; M Lussier; N M'Rabet; P Menard; M Mittmann; C Pai; C Rebischung; J L Revuelta; L Riles; C J Roberts; P Ross-MacDonald; B Scherens; M Snyder; S Sookhai-Mahadeo; R K Storms; S Véronneau; M Voet; G Volckaert; T R Ward; R Wysocki; G S Yen; K Yu; K Zimmermann; P Philippsen; M Johnston; R W Davis
Journal:  Science       Date:  1999-08-06       Impact factor: 47.728

8.  Type D retrovirus Gag polyprotein interacts with the cytosolic chaperonin TRiC.

Authors:  S Hong; G Choi; S Park; A S Chung; E Hunter; S S Rhee
Journal:  J Virol       Date:  2001-03       Impact factor: 5.103

9.  Identification of a host protein essential for assembly of immature HIV-1 capsids.

Authors:  Concepcion Zimmerman; Kevin C Klein; Patti K Kiser; Aalok R Singh; Bonnie L Firestein; Shannyn C Riba; Jaisri R Lingappa
Journal:  Nature       Date:  2002-01-03       Impact factor: 49.962

10.  The human LSm1-7 proteins colocalize with the mRNA-degrading enzymes Dcp1/2 and Xrnl in distinct cytoplasmic foci.

Authors:  Dierk Ingelfinger; Donna J Arndt-Jovin; Reinhard Lührmann; Tilmann Achsel
Journal:  RNA       Date:  2002-12       Impact factor: 4.942

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  64 in total

1.  The TY3 Gag3 spacer controls intracellular condensation and uncoating.

Authors:  Kristina Clemens; Liza Larsen; Min Zhang; Yurii Kuznetsov; Virginia Bilanchone; Arlo Randall; Adam Harned; Rhonda Dasilva; Kunio Nagashima; Alexander McPherson; Pierre Baldi; Suzanne Sandmeyer
Journal:  J Virol       Date:  2011-01-26       Impact factor: 5.103

Review 2.  Function of a retrotransposon nucleocapsid protein.

Authors:  Suzanne B Sandmeyer; Kristina A Clemens
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

3.  P-body formation is a consequence, not the cause, of RNA-mediated gene silencing.

Authors:  Ana Eulalio; Isabelle Behm-Ansmant; Daniel Schweizer; Elisa Izaurralde
Journal:  Mol Cell Biol       Date:  2007-04-02       Impact factor: 4.272

4.  Pat1 contains distinct functional domains that promote P-body assembly and activation of decapping.

Authors:  Guy R Pilkington; Roy Parker
Journal:  Mol Cell Biol       Date:  2007-12-17       Impact factor: 4.272

5.  Ty3 nucleocapsid controls localization of particle assembly.

Authors:  Liza S Z Larsen; Nadejda Beliakova-Bethell; Virginia Bilanchone; Min Zhang; Anne Lamsa; Rhonda Dasilva; G Wesley Hatfield; Kunio Nagashima; Suzanne Sandmeyer
Journal:  J Virol       Date:  2007-12-19       Impact factor: 5.103

6.  Ty3 capsid mutations reveal early and late functions of the amino-terminal domain.

Authors:  Liza S Z Larsen; Min Zhang; Nadejda Beliakova-Bethell; Virginia Bilanchone; Anne Lamsa; Kunio Nagashima; Rani Najdi; Kathryn Kosaka; Vuk Kovacevic; Jianlin Cheng; Pierre Baldi; G Wesley Hatfield; Suzanne Sandmeyer
Journal:  J Virol       Date:  2007-04-18       Impact factor: 5.103

7.  Accumulation of polyadenylated mRNA, Pab1p, eIF4E, and eIF4G with P-bodies in Saccharomyces cerevisiae.

Authors:  Muriel Brengues; Roy Parker
Journal:  Mol Biol Cell       Date:  2007-05-02       Impact factor: 4.138

8.  Packaging of host mY RNAs by murine leukemia virus may occur early in Y RNA biogenesis.

Authors:  Eric L Garcia; Adewunmi Onafuwa-Nuga; Soyeong Sim; Steven R King; Sandra L Wolin; Alice Telesnitsky
Journal:  J Virol       Date:  2009-09-23       Impact factor: 5.103

9.  P-body components are required for Ty1 retrotransposition during assembly of retrotransposition-competent virus-like particles.

Authors:  Mary Ann Checkley; Kunio Nagashima; Stephen J Lockett; Katherine M Nyswaner; David J Garfinkel
Journal:  Mol Cell Biol       Date:  2009-11-09       Impact factor: 4.272

10.  Chromatin-associated genes protect the yeast genome from Ty1 insertional mutagenesis.

Authors:  Katherine M Nyswaner; Mary Ann Checkley; Ming Yi; Robert M Stephens; David J Garfinkel
Journal:  Genetics       Date:  2008-01       Impact factor: 4.562

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