Literature DB >> 19901074

P-body components are required for Ty1 retrotransposition during assembly of retrotransposition-competent virus-like particles.

Mary Ann Checkley1, Kunio Nagashima, Stephen J Lockett, Katherine M Nyswaner, David J Garfinkel.   

Abstract

Ty1 is a retrovirus-like retrotransposon whose replication is influenced by diverse cellular processes in Saccharomyces cerevisiae. We have identified cytoplasmic P-body components encoded by DHH1, KEM1, LSM1, and PAT1 as cofactors that posttranscriptionally enhance Ty1 retrotransposition. Using fluorescent in situ hybridization and immunofluorescence microscopy, we found that Ty1 mRNA and Gag colocalize to discrete cytoplasmic foci in wild-type cells. These foci, which are distinct from P-bodies, do not form in P-body component mutants or under conditions suboptimal for retrotransposition. Our immunoelectron microscopy (IEM) data suggest that mRNA/Gag foci are sites where virus-like particles (VLPs) cluster. Overexpression of Ty1 leads to a large increase in retrotransposition in wild-type cells, which allows VLPs to be detected by IEM. However, retrotransposition is still reduced in P-body component mutants under these conditions. Moreover, the percentage of Ty1 mRNA/Gag foci and VLP clusters and levels of integrase and reverse transcriptase are reduced in these mutants. Ty1 antisense RNAs, which have been reported to inhibit Ty1 transposition, are more abundant in the kem1Delta mutant and colocalize with Ty1 mRNA in the cytoplasm. Therefore, Kem1p may prevent the aggregation of Ty1 antisense and mRNAs. Overall, our results suggest that P-body components enhance the formation of retrotransposition-competent Ty1 VLPs.

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Year:  2009        PMID: 19901074      PMCID: PMC2798465          DOI: 10.1128/MCB.00251-09

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  60 in total

1.  The Saccharomyces cerevisiae DNA recombination and repair functions of the RAD52 epistasis group inhibit Ty1 transposition.

Authors:  A J Rattray; B K Shafer; D J Garfinkel
Journal:  Genetics       Date:  2000-02       Impact factor: 4.562

2.  Posttranslational inhibition of Ty1 retrotransposition by nucleotide excision repair/transcription factor TFIIH subunits Ssl2p and Rad3p.

Authors:  B S Lee; C P Lichtenstein; B Faiola; L A Rinckel; W Wysock; M J Curcio; D J Garfinkel
Journal:  Genetics       Date:  1998-04       Impact factor: 4.562

3.  The Sgs1 helicase of Saccharomyces cerevisiae inhibits retrotransposition of Ty1 multimeric arrays.

Authors:  M Bryk; M Banerjee; D Conte; M J Curcio
Journal:  Mol Cell Biol       Date:  2001-08       Impact factor: 4.272

4.  Cooperation between reverse transcriptase and integrase during reverse transcription and formation of the preintegrative complex of Ty1.

Authors:  Marcelle Wilhelm; F-X Wilhelm
Journal:  Eukaryot Cell       Date:  2006-10

5.  Ty1 defect in proteolysis at high temperature.

Authors:  Joseph F Lawler; Daniel P Haeusser; Angie Dull; Jef D Boeke; Jill B Keeney
Journal:  J Virol       Date:  2002-05       Impact factor: 5.103

6.  Chromatin-associated genes protect the yeast genome from Ty1 insertional mutagenesis.

Authors:  Katherine M Nyswaner; Mary Ann Checkley; Ming Yi; Robert M Stephens; David J Garfinkel
Journal:  Genetics       Date:  2008-01       Impact factor: 4.562

7.  Analysis of a Ty1-less variant of Saccharomyces paradoxus: the gain and loss of Ty1 elements.

Authors:  Sharon P Moore; Gianni Liti; Karen M Stefanisko; Katherine M Nyswaner; Caroline Chang; Edward J Louis; David J Garfinkel
Journal:  Yeast       Date:  2004-06       Impact factor: 3.239

8.  Transpositional competence and transcription of endogenous Ty elements in Saccharomyces cerevisiae: implications for regulation of transposition.

Authors:  M J Curcio; N J Sanders; D J Garfinkel
Journal:  Mol Cell Biol       Date:  1988-09       Impact factor: 4.272

9.  Genetic evidence for a connection between Rous sarcoma virus gag nuclear trafficking and genomic RNA packaging.

Authors:  Rachel Garbitt-Hirst; Scott P Kenney; Leslie J Parent
Journal:  J Virol       Date:  2009-04-15       Impact factor: 5.103

10.  Interactions between brome mosaic virus RNAs and cytoplasmic processing bodies.

Authors:  Carla J Beckham; Heather R Light; T Amar Nissan; Paul Ahlquist; Roy Parker; Amine Noueiry
Journal:  J Virol       Date:  2007-07-03       Impact factor: 5.103

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  49 in total

Review 1.  Function of a retrotransposon nucleocapsid protein.

Authors:  Suzanne B Sandmeyer; Kristina A Clemens
Journal:  RNA Biol       Date:  2010-11-01       Impact factor: 4.652

2.  Preferential retrotransposition in aging yeast mother cells is correlated with increased genome instability.

Authors:  Melissa N Patterson; Alison E Scannapieco; Pak Ho Au; Savanna Dorsey; Catherine A Royer; Patrick H Maxwell
Journal:  DNA Repair (Amst)       Date:  2015-08-07

3.  P bodies inhibit retrotransposition of endogenous intracisternal a particles.

Authors:  Chunye Lu; Xavier Contreras; B Matija Peterlin
Journal:  J Virol       Date:  2011-04-27       Impact factor: 5.103

4.  T-body formation precedes virus-like particle maturation in S. cerevisiae.

Authors:  Francisco Malagon; Torben Heick Jensen
Journal:  RNA Biol       Date:  2011-03-01       Impact factor: 4.652

5.  HIV-1 replication and APOBEC3 antiviral activity are not regulated by P bodies.

Authors:  Prabhjeet K Phalora; Nathan M Sherer; Steven M Wolinsky; Chad M Swanson; Michael H Malim
Journal:  J Virol       Date:  2012-08-22       Impact factor: 5.103

6.  Manipulation of cellular processing bodies and their constituents by viruses.

Authors:  Asit K Pattnaik; Phat X Dinh
Journal:  DNA Cell Biol       Date:  2013-04-25       Impact factor: 3.311

Review 7.  A self-encoded capsid derivative restricts Ty1 retrotransposition in Saccharomyces.

Authors:  David J Garfinkel; Jessica M Tucker; Agniva Saha; Yuri Nishida; Katarzyna Pachulska-Wieczorek; Leszek Błaszczyk; Katarzyna J Purzycka
Journal:  Curr Genet       Date:  2015-12-09       Impact factor: 3.886

8.  Perturbation of the P-body component Mov10 inhibits HIV-1 infectivity.

Authors:  Vyacheslav Furtak; Alok Mulky; Stephen A Rawlings; Lina Kozhaya; KyeongEun Lee; Vineet N Kewalramani; Derya Unutmaz
Journal:  PLoS One       Date:  2010-02-05       Impact factor: 3.240

9.  Characterization of LINE-1 ribonucleoprotein particles.

Authors:  Aurélien J Doucet; Amy E Hulme; Elodie Sahinovic; Deanna A Kulpa; John B Moldovan; Huira C Kopera; Jyoti N Athanikar; Manel Hasnaoui; Alain Bucheton; John V Moran; Nicolas Gilbert
Journal:  PLoS Genet       Date:  2010-10-07       Impact factor: 5.917

10.  Sequence requirements for localization and packaging of Ty3 retroelement RNA.

Authors:  Kristina Clemens; Virginia Bilanchone; Nadejda Beliakova-Bethell; Liza S Z Larsen; Kim Nguyen; Suzanne Sandmeyer
Journal:  Virus Res       Date:  2012-10-13       Impact factor: 3.303

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