Literature DB >> 16364306

RNA editing sites in plant mitochondria can share cis-elements.

Johannes A van der Merwe1, Mizuki Takenaka, Julia Neuwirt, Daniil Verbitskiy, Axel Brennicke.   

Abstract

RNA editing in flowering plant mitochondria alters numerous C nucleotides in a given mRNA molecule to U residues. To investigate whether neighbouring editing sites can influence each other we analyzed in vitro RNA editing of two sites spaced 30 nt apart. Deletion and competition experiments show that these two sites carry independent essential specificity determinants in the respective upstream 20-30 nucleotides. However, deletion of a an upstream sequence region promoting editing of the upstream site concomitantly decreases RNA editing of the second site 50-70 nucleotides downstream. This result suggests that supporting cis-/trans-interactions can be effective over larger distances and can affect more than one editing event.

Mesh:

Substances:

Year:  2005        PMID: 16364306     DOI: 10.1016/j.febslet.2005.12.011

Source DB:  PubMed          Journal:  FEBS Lett        ISSN: 0014-5793            Impact factor:   4.124


  15 in total

1.  Reverse genetic screening identifies five E-class PPR proteins involved in RNA editing in mitochondria of Arabidopsis thaliana.

Authors:  Mizuki Takenaka; Daniil Verbitskiy; Anja Zehrmann; Axel Brennicke
Journal:  J Biol Chem       Date:  2010-06-21       Impact factor: 5.157

Review 2.  When you can't trust the DNA: RNA editing changes transcript sequences.

Authors:  Volker Knoop
Journal:  Cell Mol Life Sci       Date:  2010-10-12       Impact factor: 9.261

3.  Multiple specificity recognition motifs enhance plant mitochondrial RNA editing in vitro.

Authors:  Daniil Verbitskiy; Johannes A van der Merwe; Anja Zehrmann; Axel Brennicke; Mizuki Takenaka
Journal:  J Biol Chem       Date:  2008-07-01       Impact factor: 5.157

4.  Two related RNA-editing proteins target the same sites in mitochondria of Arabidopsis thaliana.

Authors:  Daniil Verbitskiy; Anja Zehrmann; Barbara Härtel; Axel Brennicke; Mizuki Takenaka
Journal:  J Biol Chem       Date:  2012-09-13       Impact factor: 5.157

5.  The pentatricopeptide repeat protein OTP87 is essential for RNA editing of nad7 and atp1 transcripts in Arabidopsis mitochondria.

Authors:  Kamel Hammani; Catherine Colas des Francs-Small; Mizuki Takenaka; Sandra K Tanz; Kenji Okuda; Toshiharu Shikanai; Axel Brennicke; Ian Small
Journal:  J Biol Chem       Date:  2011-04-19       Impact factor: 5.157

6.  MEF9, an E-subclass pentatricopeptide repeat protein, is required for an RNA editing event in the nad7 transcript in mitochondria of Arabidopsis.

Authors:  Mizuki Takenaka
Journal:  Plant Physiol       Date:  2009-12-16       Impact factor: 8.340

7.  MEF10 is required for RNA editing at nad2-842 in mitochondria of Arabidopsis thaliana and interacts with MORF8.

Authors:  Barbara Härtel; Anja Zehrmann; Daniil Verbitskiy; Johannes A van der Merwe; Axel Brennicke; Mizuki Takenaka
Journal:  Plant Mol Biol       Date:  2013-01-04       Impact factor: 4.076

8.  A comparative genomics approach identifies a PPR-DYW protein that is essential for C-to-U editing of the Arabidopsis chloroplast accD transcript.

Authors:  John C Robbins; Wade P Heller; Maureen R Hanson
Journal:  RNA       Date:  2009-04-24       Impact factor: 4.942

9.  Genetic architecture of mitochondrial editing in Arabidopsis thaliana.

Authors:  Stéphane Bentolila; Leah E Elliott; Maureen R Hanson
Journal:  Genetics       Date:  2007-06-11       Impact factor: 4.562

10.  A DYW domain-containing pentatricopeptide repeat protein is required for RNA editing at multiple sites in mitochondria of Arabidopsis thaliana.

Authors:  Anja Zehrmann; Daniil Verbitskiy; Johannes A van der Merwe; Axel Brennicke; Mizuki Takenaka
Journal:  Plant Cell       Date:  2009-02-27       Impact factor: 11.277

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.