Literature DB >> 16347706

Estimating bacterial production in marine waters from the simultaneous incorporation of thymidine and leucine.

G Chin-Leo1, D L Kirchman.   

Abstract

We examined the simultaneous incorporation of [H]thymidine and [C]leucine to obtain two independent indices of bacterial production (DNA and protein syntheses) in a single incubation. Incorporation rates of leucine estimated by the dual-label method were generally higher than those obtained by the single-label method, but the differences were small (dual/single = 1.1 +/- 0.2 [mean +/- standard deviation]) and were probably due to the presence of labeled leucyl-tRNA in the cold trichloroacetic acid-insoluble fraction. There were no significant differences in thymidine incorporation between dual- and single-label incubations (dual/ single = 1.03 +/- 0.13). Addition of the two substrates in relatively large amounts (25 nM) did not apparently increase bacterial activity during short incubations (<5 h). With the dual-label method we found that thymidine and leucine incorporation rates covaried over depth profiles of the Chesapeake Bay. Estimates of bacterial production based on thymidine and leucine differed by less than 25%. Although the need for appropriate conversion factors has not been eliminated, the dual-label approach can be used to examine the variation in bacterial production while ensuring that the observed variation in incorporation rates is due to real changes in bacterial production rather than changes in conversion factors or introduction of other artifacts.

Entities:  

Year:  1988        PMID: 16347706      PMCID: PMC202782          DOI: 10.1128/aem.54.8.1934-1939.1988

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  9 in total

1.  Tests of the critical assumptions of the dilution method for estimating bacterivory by microeucaryotes.

Authors:  S C Tremaine; A L Mills
Journal:  Appl Environ Microbiol       Date:  1987-12       Impact factor: 4.792

2.  Potential importance of fish predation and zooplankton grazing on natural populations of freshwater bacteria.

Authors:  B Riemann
Journal:  Appl Environ Microbiol       Date:  1985-08       Impact factor: 4.792

3.  Depth distribution of bacterial production in a stratified lake with an anoxic hypolimnion.

Authors:  R J McDonough; R W Sanders; K G Porter; D L Kirchman
Journal:  Appl Environ Microbiol       Date:  1986-11       Impact factor: 4.792

4.  Estimating Bacterioplankton Production by Measuring [H]thymidine Incorporation in a Eutrophic Swedish Lake.

Authors:  R T Bell; G M Ahlgren; I Ahlgren
Journal:  Appl Environ Microbiol       Date:  1983-06       Impact factor: 4.792

5.  Bacterioplankton secondary production estimates for coastal waters of british columbia, antarctica, and california.

Authors:  J A Fuhrman; F Azam
Journal:  Appl Environ Microbiol       Date:  1980-06       Impact factor: 4.792

6.  Use of nuclepore filters for counting bacteria by fluorescence microscopy.

Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

7.  Thymidine kinase: evidence for its absence from Neurospora crassa and some other micro-organisms, and the relevance of this to the specific labelling of deoxyribonucleic acid.

Authors:  A R Grivell; J F Jackson
Journal:  J Gen Microbiol       Date:  1968-12

8.  Estimates of bacterial growth from changes in uptake rates and biomass.

Authors:  D Kirchman; H Ducklow; R Mitchell
Journal:  Appl Environ Microbiol       Date:  1982-12       Impact factor: 4.792

9.  Leucine incorporation and its potential as a measure of protein synthesis by bacteria in natural aquatic systems.

Authors:  D Kirchman; E K'nees; R Hodson
Journal:  Appl Environ Microbiol       Date:  1985-03       Impact factor: 4.792

  9 in total
  25 in total

1.  Rapid virus production and removal as measured with fluorescently labeled viruses as tracers.

Authors:  R T Noble; J A Fuhrman
Journal:  Appl Environ Microbiol       Date:  2000-09       Impact factor: 4.792

2.  Exploring bacteriplankton growth and protein synthesis to determine conversion factors across a gradient of dissolved organic matter.

Authors:  E Pulido-Villena; I Reche
Journal:  Microb Ecol       Date:  2003-07       Impact factor: 4.552

3.  Phage community dynamics in hot springs.

Authors:  Mya Breitbart; Linda Wegley; Steven Leeds; Tom Schoenfeld; Forest Rohwer
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

4.  Characterization of the sediment bacterial community in groundwater discharge zones of an alkaline fen: a seasonal study.

Authors:  T C Gsell; W E Holben; R M Ventullo
Journal:  Appl Environ Microbiol       Date:  1997-08       Impact factor: 4.792

5.  Effects of deposit-feeding macrofauna on benthic bacteria, viruses, and protozoa in a silty freshwater sediment.

Authors:  Claudia Wieltschnig; Ulrike R Fischer; Branko Velimirov; Alexander K T Kirschner
Journal:  Microb Ecol       Date:  2007-09-19       Impact factor: 4.552

6.  Incorporation of [h]leucine and [h]valine into protein of freshwater bacteria: uptake kinetics and intracellular isotope dilution.

Authors:  N O Jørgensen
Journal:  Appl Environ Microbiol       Date:  1992-11       Impact factor: 4.792

7.  Ethanol extraction requirement for purification of protein labeled with [h]leucine in aquatic bacterial production studies.

Authors:  R J Wicks; R D Robarts
Journal:  Appl Environ Microbiol       Date:  1988-12       Impact factor: 4.792

8.  merA gene expression in aquatic environments measured by mRNA production and Hg(II) volatilization.

Authors:  S Nazaret; W H Jeffrey; E Saouter; R Von Haven; T Barkay
Journal:  Appl Environ Microbiol       Date:  1994-11       Impact factor: 4.792

9.  Seasonal variation in lysogeny as depicted by prophage induction in Tampa Bay, Florida.

Authors:  S J Williamson; L A Houchin; L McDaniel; J H Paul
Journal:  Appl Environ Microbiol       Date:  2002-09       Impact factor: 4.792

10.  Use of radiolabelled thymidine and leucine to estimate bacterial production in soils from continental antarctica.

Authors:  B J Tibbles; J M Harris
Journal:  Appl Environ Microbiol       Date:  1996-02       Impact factor: 4.792

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