Literature DB >> 10966392

Rapid virus production and removal as measured with fluorescently labeled viruses as tracers.

R T Noble1, J A Fuhrman.   

Abstract

Pelagic marine viruses have been shown to cause significant mortality of heterotrophic bacteria, cyanobacteria, and phytoplankton. It was previously demonstrated, in nearshore California waters, that viruses contributed to up to 50% of bacterial mortality, comparable to protists. However, in less productive waters, rates of virus production and removal and estimates of virus-mediated bacterial mortality have been difficult to determine. We have measured rates of virus production and removal, in nearshore and offshore California waters, by using fluorescently labeled viruses (FLV) as tracers. Our approach is mathematically similar to the isotope dilution technique, employed in the past to simultaneously measure the release and uptake of ammonia and amino acids. The results indicated overall virus removal rates in the dark ranging from 1.8 to 6.2% h(-1) and production rates in the dark ranging from 1.9 to 6.1% h(-1), corresponding to turnover times of virus populations of 1 to 2 days, even in oligotrophic offshore waters. Virus removal rates determined by the FLV tracer method were compared to rates of virus degradation, determined at the same locations by radiolabeling methods, and were similar even though the current FLV method is suitable for only dark incubations. Our results support previous findings that virus impacts on bacterial populations may be more important in some environments and less so in others. This new method can be used to determine rates of virus degradation, production, and turnover in eutrophic, mesotrophic, and oligotrophic waters and will provide important inputs for future investigations of microbial food webs.

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Year:  2000        PMID: 10966392      PMCID: PMC92222          DOI: 10.1128/AEM.66.9.3790-3797.2000

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  19 in total

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Journal:  Appl Environ Microbiol       Date:  1992-11       Impact factor: 4.792

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Journal:  Appl Environ Microbiol       Date:  1996-04       Impact factor: 4.792

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Journal:  Appl Environ Microbiol       Date:  1985-03       Impact factor: 4.792

9.  Extracellular enzyme activity: Indications for high short-term variability in a coastal marine ecosystem.

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Journal:  Microb Ecol       Date:  1995-09       Impact factor: 4.552

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Authors:  D L Kirchman
Journal:  Microb Ecol       Date:  1994-09       Impact factor: 4.552

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  27 in total

1.  Factors controlling extremely productive heterotrophic bacterial communities in shallow soda pools.

Authors:  A Eiler; A H Farnleitner; T C Zechmeister; A Herzig; C Hurban; W Wesner; R Krachler; B Velimirov; A K T Kirschner
Journal:  Microb Ecol       Date:  2003-05-13       Impact factor: 4.552

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Authors:  Michael Borriss; Elisabeth Helmke; Renate Hanschke; Thomas Schweder
Journal:  Extremophiles       Date:  2003-06-19       Impact factor: 2.395

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Authors:  I Hewson; J A Fuhrman
Journal:  Microb Ecol       Date:  2003-09-17       Impact factor: 4.552

4.  Viral activity in two contrasting lake ecosystems.

Authors:  Yvan Bettarel; Télesphore Sime-Ngando; Christian Amblard; John Dolan
Journal:  Appl Environ Microbiol       Date:  2004-05       Impact factor: 4.792

5.  Phage community dynamics in hot springs.

Authors:  Mya Breitbart; Linda Wegley; Steven Leeds; Tom Schoenfeld; Forest Rohwer
Journal:  Appl Environ Microbiol       Date:  2004-03       Impact factor: 4.792

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Authors:  Lucia Bongiorni; Mirko Magagnini; Monica Armeni; Rachel Noble; Roberto Danovaro
Journal:  Appl Environ Microbiol       Date:  2005-11       Impact factor: 4.792

7.  Multiplex quantitative real-time reverse transcriptase PCR for F+-specific RNA coliphages: a method for use in microbial source tracking.

Authors:  Marek Kirs; David C Smith
Journal:  Appl Environ Microbiol       Date:  2006-12-01       Impact factor: 4.792

8.  Determination of viral production in aquatic sediments using the dilution-based approach.

Authors:  Antonio Dell'Anno; Cinzia Corinaldesi; Mirko Magagnini; Roberto Danovaro
Journal:  Nat Protoc       Date:  2009-06-11       Impact factor: 13.491

9.  AbiV, a novel antiphage abortive infection mechanism on the chromosome of Lactococcus lactis subsp. cremoris MG1363.

Authors:  Jakob Haaber; Sylvain Moineau; Louis-Charles Fortier; Karin Hammer
Journal:  Appl Environ Microbiol       Date:  2008-09-05       Impact factor: 4.792

10.  Influence of humic substances on bacterial and viral dynamics in freshwaters.

Authors:  Alexandre M Anesio; Christin Hollas; Wilhelm Granéli; Johanna Laybourn-Parry
Journal:  Appl Environ Microbiol       Date:  2004-08       Impact factor: 4.792

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