Literature DB >> 6760812

Estimates of bacterial growth from changes in uptake rates and biomass.

D Kirchman, H Ducklow, R Mitchell.   

Abstract

Rates of nucleic acid synthesis have been used to examine microbiol growth in natural waters. These rates are calculated from the incorporation of [3H]adenine and [3H]thymidine for RNA and DNA syntheses, respectively. Several additional biochemical parameters must be measured or taken from the literature to estimate growth rates from the incorporation of the tritiated compounds. We propose a simple method of estimating a conversion factor which obviates measuring these biochemical parameters. The change in bacterial abundance and incorporation rates of [3H]thymidine was measured in samples from three environments. The incorporation of exogenous [3H]thymidine was closely coupled with growth and cell division as estimated from the increase in bacterial biomass. Analysis of the changes in incorporation rates and initial bacterial abundance yielded a conversion factor for calculating bacterial production rates from incorporation rates. Furthermore, the growth rate of only those bacteria incorporating the compound can be estimated. The data analysis and experimental design can be used to estimate the proportion of nondividing cells and to examine changes in cell volumes.

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Year:  1982        PMID: 6760812      PMCID: PMC242188          DOI: 10.1128/aem.44.6.1296-1307.1982

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  14 in total

1.  Simultaneous rates of ribonucleic Acid and deoxyribonucleic Acid syntheses for estimating growth and cell division of aquatic microbial communities.

Authors:  D M Karl
Journal:  Appl Environ Microbiol       Date:  1981-11       Impact factor: 4.792

2.  Frequency of dividing cells as an estimator of bacterial productivity.

Authors:  S Y Newell; R R Christian
Journal:  Appl Environ Microbiol       Date:  1981-07       Impact factor: 4.792

3.  Contribution of particle-bound bacteria to total microheterotrophic activity in five ponds and two marshes.

Authors:  D Kirchman; R Mitchell
Journal:  Appl Environ Microbiol       Date:  1982-01       Impact factor: 4.792

4.  Frequency of dividing cells, a new approach to the determination of bacterial growth rates in aquatic environments.

Authors:  A Hagström; U Larsson; P Hörstedt; S Normark
Journal:  Appl Environ Microbiol       Date:  1979-05       Impact factor: 4.792

5.  Assimilatory sulfur metabolism in marine microorganisms: considerations for the application of sulfate incorporation into protein as a measurement of natural population protein synthesis.

Authors:  R L Cuhel; C D Taylor; H W Jannasch
Journal:  Appl Environ Microbiol       Date:  1982-01       Impact factor: 4.792

6.  Use of nuclepore filters for counting bacteria by fluorescence microscopy.

Authors:  J E Hobbie; R J Daley; S Jasper
Journal:  Appl Environ Microbiol       Date:  1977-05       Impact factor: 4.792

Review 7.  Mathematics of microbial populations.

Authors:  P R Painter; A G Marr
Journal:  Annu Rev Microbiol       Date:  1968       Impact factor: 15.500

8.  Muramic acid as a measure of microbial biomass in estuarine and marine samples.

Authors:  J D King; D C White
Journal:  Appl Environ Microbiol       Date:  1977-04       Impact factor: 4.792

9.  Determination of bacterial number and biomass in the marine environment.

Authors:  S W Watson; T J Novitsky; H L Quinby; F W Valois
Journal:  Appl Environ Microbiol       Date:  1977-04       Impact factor: 4.792

10.  Autoradiography and epifluorescence microscopy combined for the determination of number and spectrum of actively metabolizing bacteria in natural water.

Authors:  L A Meyer-Reil
Journal:  Appl Environ Microbiol       Date:  1978-09       Impact factor: 4.792

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  57 in total

1.  Spatial and temporal variations in chitinolytic gene expression and bacterial biomass production during chitin degradation.

Authors:  A M Baty; C C Eastburn; S Techkarnjanaruk; A E Goodman; G G Geesey
Journal:  Appl Environ Microbiol       Date:  2000-08       Impact factor: 4.792

2.  Factors controlling extremely productive heterotrophic bacterial communities in shallow soda pools.

Authors:  A Eiler; A H Farnleitner; T C Zechmeister; A Herzig; C Hurban; W Wesner; R Krachler; B Velimirov; A K T Kirschner
Journal:  Microb Ecol       Date:  2003-05-13       Impact factor: 4.552

3.  Dual staining of natural bacterioplankton with 4',6-diamidino-2-phenylindole and fluorescent oligonucleotide probes targeting kingdom-level 16S rRNA sequences.

Authors:  R E Hicks; R I Amann; D A Stahl
Journal:  Appl Environ Microbiol       Date:  1992-07       Impact factor: 4.792

4.  Characterization of the sediment bacterial community in groundwater discharge zones of an alkaline fen: a seasonal study.

Authors:  T C Gsell; W E Holben; R M Ventullo
Journal:  Appl Environ Microbiol       Date:  1997-08       Impact factor: 4.792

5.  Sample dilution and bacterial community composition influence empirical leucine-to-carbon conversion factors in surface waters of the world's oceans.

Authors:  Eva Teira; Víctor Hernando-Morales; Francisco M Cornejo-Castillo; Laura Alonso-Sáez; Hugo Sarmento; Joaquín Valencia-Vila; Teresa Serrano Catalá; Marta Hernández-Ruiz; Marta M Varela; Isabel Ferrera; Xosé Anxelu Gutiérrez Morán; Josep M Gasol
Journal:  Appl Environ Microbiol       Date:  2015-09-25       Impact factor: 4.792

6.  Seasonal bacterial production in a dimictic lake as measured by increases in cell numbers and thymidine incorporation.

Authors:  C R Lovell; A Konopka
Journal:  Appl Environ Microbiol       Date:  1985-03       Impact factor: 4.792

7.  Effects of toxic substances on natural bacterial assemblages determined by means of [h]thymidine incorporation.

Authors:  B Riemann; P Lindgaard-Jørgensen
Journal:  Appl Environ Microbiol       Date:  1990-01       Impact factor: 4.792

8.  Assessment of [h]thymidine incorporation into DNA as a method to determine bacterial productivity in stream bed sediments.

Authors:  L A Kaplan; T L Bott; J K Bielicki
Journal:  Appl Environ Microbiol       Date:  1992-11       Impact factor: 4.792

9.  Isolation of Typical Marine Bacteria by Dilution Culture: Growth, Maintenance, and Characteristics of Isolates under Laboratory Conditions.

Authors:  F Schut; E J de Vries; J C Gottschal; B R Robertson; W Harder; R A Prins; D K Button
Journal:  Appl Environ Microbiol       Date:  1993-07       Impact factor: 4.792

10.  Intraspecific and interspecific variation in thermotolerance and photoacclimation in Symbiodinium dinoflagellates.

Authors:  Erika M Díaz-Almeyda; C Prada; A H Ohdera; H Moran; D J Civitello; R Iglesias-Prieto; T A Carlo; T C LaJeunesse; M Medina
Journal:  Proc Biol Sci       Date:  2017-12-06       Impact factor: 5.349

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