Literature DB >> 1634538

Purification and characterization of the bacteriophage T7 gene 2.5 protein. A single-stranded DNA-binding protein.

Y T Kim1, S Tabor, C Bortner, J D Griffith, C C Richardson.   

Abstract

Bacteriophage T7 gene 2.5 protein has been purified to homogeneity from cells overexpressing its gene. Native gene 2.5 protein consists of a dimer of two identical subunits of molecular weight 25,562. Gene 2.5 protein binds specifically to single-stranded DNA with a stoichiometry of approximately 7 nucleotides bound per monomer of gene 2.5 protein; binding appears to be noncooperative. Electron microscopic analysis shows that gene 2.5 protein is able to disrupt the secondary structure of single-stranded DNA. The single-stranded DNA is extended into a chain of gene 2.5 protein dimers bound along the DNA. In fluorescence quenching and nitrocellulose filter binding assays, the binding constants of gene 2.5 protein to single-stranded DNA are 1.2 x 10(6) M-1 and 3.8 x 10(6) M-1, respectively. Escherichia coli single-stranded DNA-binding protein and phage T4 gene 32 protein bind to single-stranded DNA more tightly by a factor of 25. Fluorescence spectroscopy suggests that tyrosine residue(s), but not tryptophan residues, on gene 2.5 protein interacts with single-stranded DNA.

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Year:  1992        PMID: 1634538

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  33 in total

1.  Structure of the gene 2.5 protein, a single-stranded DNA binding protein encoded by bacteriophage T7.

Authors:  T Hollis; J M Stattel; D S Walther; C C Richardson; T Ellenberger
Journal:  Proc Natl Acad Sci U S A       Date:  2001-07-31       Impact factor: 11.205

2.  Two modes of interaction of the single-stranded DNA-binding protein of bacteriophage T7 with the DNA polymerase-thioredoxin complex.

Authors:  Sharmistha Ghosh; Samir M Hamdan; Charles C Richardson
Journal:  J Biol Chem       Date:  2010-04-06       Impact factor: 5.157

3.  DNA synthesis provides the driving force to accelerate DNA unwinding by a helicase.

Authors:  Natalie M Stano; Yong-Joo Jeong; Ilker Donmez; Padmaja Tummalapalli; Mikhail K Levin; Smita S Patel
Journal:  Nature       Date:  2005-05-19       Impact factor: 49.962

4.  A unique loop in T7 DNA polymerase mediates the binding of helicase-primase, DNA binding protein, and processivity factor.

Authors:  Samir M Hamdan; Boriana Marintcheva; Timothy Cook; Seung-Joo Lee; Stanley Tabor; Charles C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  2005-03-28       Impact factor: 11.205

Review 5.  Replication-fork dynamics.

Authors:  Karl E Duderstadt; Rodrigo Reyes-Lamothe; Antoine M van Oijen; David J Sherratt
Journal:  Cold Spring Harb Perspect Biol       Date:  2014-01-01       Impact factor: 10.005

Review 6.  Isothermal DNA amplification in vitro: the helicase-dependent amplification system.

Authors:  Yong-Joo Jeong; Kkothanahreum Park; Dong-Eun Kim
Journal:  Cell Mol Life Sci       Date:  2009-07-24       Impact factor: 9.261

7.  The Essential, Ubiquitous Single-Stranded DNA-Binding Proteins.

Authors:  Marcos T Oliveira; Grzegorz L Ciesielski
Journal:  Methods Mol Biol       Date:  2021

Review 8.  Optical tweezers experiments resolve distinct modes of DNA-protein binding.

Authors:  Micah J McCauley; Mark C Williams
Journal:  Biopolymers       Date:  2009-04       Impact factor: 2.505

9.  Functional roles of the N- and C-terminal regions of the human mitochondrial single-stranded DNA-binding protein.

Authors:  Marcos T Oliveira; Laurie S Kaguni
Journal:  PLoS One       Date:  2010-10-28       Impact factor: 3.240

10.  Bacteriophage T7 gene 2.5 protein: an essential protein for DNA replication.

Authors:  Y T Kim; C C Richardson
Journal:  Proc Natl Acad Sci U S A       Date:  1993-11-01       Impact factor: 11.205

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