Literature DB >> 24096823

Application of machine learning algorithms for clinical predictive modeling: a data-mining approach in SCT.

R Shouval1, O Bondi2, H Mishan2, A Shimoni3, R Unger2, A Nagler3.   

Abstract

Data collected from hematopoietic SCT (HSCT) centers are becoming more abundant and complex owing to the formation of organized registries and incorporation of biological data. Typically, conventional statistical methods are used for the development of outcome prediction models and risk scores. However, these analyses carry inherent properties limiting their ability to cope with large data sets with multiple variables and samples. Machine learning (ML), a field stemming from artificial intelligence, is part of a wider approach for data analysis termed data mining (DM). It enables prediction in complex data scenarios, familiar to practitioners and researchers. Technological and commercial applications are all around us, gradually entering clinical research. In the following review, we would like to expose hematologists and stem cell transplanters to the concepts, clinical applications, strengths and limitations of such methods and discuss current research in HSCT. The aim of this review is to encourage utilization of the ML and DM techniques in the field of HSCT, including prediction of transplantation outcome and donor selection.

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Year:  2013        PMID: 24096823     DOI: 10.1038/bmt.2013.146

Source DB:  PubMed          Journal:  Bone Marrow Transplant        ISSN: 0268-3369            Impact factor:   5.483


  42 in total

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2.  Learning from imbalanced data in surveillance of nosocomial infection.

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Review 3.  Measuring diagnostic and predictive accuracy in disease management: an introduction to receiver operating characteristic (ROC) analysis.

Authors:  Ariel Linden
Journal:  J Eval Clin Pract       Date:  2006-04       Impact factor: 2.431

4.  Inappropriate use of bivariable analysis to screen risk factors for use in multivariable analysis.

Authors:  G W Sun; T L Shook; G L Kay
Journal:  J Clin Epidemiol       Date:  1996-08       Impact factor: 6.437

Review 5.  Advantages and disadvantages of using artificial neural networks versus logistic regression for predicting medical outcomes.

Authors:  J V Tu
Journal:  J Clin Epidemiol       Date:  1996-11       Impact factor: 6.437

Review 6.  Mining electronic health records: towards better research applications and clinical care.

Authors:  Peter B Jensen; Lars J Jensen; Søren Brunak
Journal:  Nat Rev Genet       Date:  2012-05-02       Impact factor: 53.242

7.  Missing data imputation using statistical and machine learning methods in a real breast cancer problem.

Authors:  José M Jerez; Ignacio Molina; Pedro J García-Laencina; Emilio Alba; Nuria Ribelles; Miguel Martín; Leonardo Franco
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8.  A risk score for mortality after allogeneic hematopoietic cell transplantation.

Authors:  Tanyalak Parimon; David H Au; Paul J Martin; Jason W Chien
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9.  Hematopoietic cell transplantation-comorbidity index and Karnofsky performance status are independent predictors of morbidity and mortality after allogeneic nonmyeloablative hematopoietic cell transplantation.

Authors:  Mohamed Sorror; Barry Storer; Brenda M Sandmaier; David G Maloney; Thomas R Chauncey; Amelia Langston; Richard T Maziarz; Michael Pulsipher; Peter A McSweeney; Rainer Storb
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Review 10.  What are decision trees?

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  31 in total

1.  External validation and comparison of multiple prognostic scores in allogeneic hematopoietic stem cell transplantation.

Authors:  Roni Shouval; Joshua A Fein; Aniela Shouval; Ivetta Danylesko; Noga Shem-Tov; Maya Zlotnik; Ronit Yerushalmi; Avichai Shimoni; Arnon Nagler
Journal:  Blood Adv       Date:  2019-06-25

2.  Conditioning intensity and antilymphocyte globulin: towards personalized transplant strategies?

Authors:  Martin Bornhäuser
Journal:  Haematologica       Date:  2019-06       Impact factor: 9.941

3.  Identification of immune correlates of protection in Shigella infection by application of machine learning.

Authors:  Jorge M Arevalillo; Marcelo B Sztein; Karen L Kotloff; Myron M Levine; Jakub K Simon
Journal:  J Biomed Inform       Date:  2017-08-09       Impact factor: 6.317

4.  Using a machine learning algorithm to predict acute graft-versus-host disease following allogeneic transplantation.

Authors:  Yasuyuki Arai; Tadakazu Kondo; Kyoko Fuse; Yasuhiko Shibasaki; Masayoshi Masuko; Junichi Sugita; Takanori Teshima; Naoyuki Uchida; Takahiro Fukuda; Kazuhiko Kakihana; Yukiyasu Ozawa; Tetsuya Eto; Masatsugu Tanaka; Kazuhiro Ikegame; Takehiko Mori; Koji Iwato; Tatsuo Ichinohe; Yoshinobu Kanda; Yoshiko Atsuta
Journal:  Blood Adv       Date:  2019-11-26

5.  Machine Learning Prediction Models for In-Hospital Mortality After Transcatheter Aortic Valve Replacement.

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Journal:  JACC Cardiovasc Interv       Date:  2019-07-22       Impact factor: 11.195

6.  Neural Predictors of Initiating Alcohol Use During Adolescence.

Authors:  Lindsay M Squeglia; Tali M Ball; Joanna Jacobus; Ty Brumback; Benjamin S McKenna; Tam T Nguyen-Louie; Scott F Sorg; Martin P Paulus; Susan F Tapert
Journal:  Am J Psychiatry       Date:  2016-08-19       Impact factor: 18.112

Review 7.  From patient centered risk factors to comprehensive prognostic models: a suggested framework for outcome prediction in umbilical cord blood transplantation.

Authors:  Roni Shouval; Arnon Nagler
Journal:  Stem Cell Investig       Date:  2017-05-24

8.  Volume and Value of Big Healthcare Data.

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Journal:  J Med Stat Inform       Date:  2016

9.  Machine learning to identify multigland disease in primary hyperparathyroidism.

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Journal:  J Surg Res       Date:  2017-06-29       Impact factor: 2.192

10.  A Deep Learning-Based Method for Forecasting Gold Price with Respect to Pandemics.

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Journal:  SN Comput Sci       Date:  2021-06-12
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