Literature DB >> 16316252

DNA molecular motor driven micromechanical cantilever arrays.

Wenmiao Shu1, Dongsheng Liu, Moyu Watari, Christian K Riener, Torsten Strunz, Mark E Welland, Shankar Balasubramanian, Rachel A McKendry.   

Abstract

The unique ability of living systems to translate biochemical reactions into mechanical work has inspired the design of synthetic DNA motors which generate nanoscale motion via controlled conformational change. However, while Nature has evolved intricate mechanisms to convert molecular shape change into specific micrometer-scale mechanical cellular responses, the integration of artificial DNA motors with mechanical devices presents a major challenge. Here we report the direct integration between an ensemble of DNA motors and an array of microfabricated silicon cantilevers. The forces exerted by the precise duplex to nonclassical i-motif conformational change were probed via differential measurements using an in-situ reference cantilever coated with a nonspecific sequence of DNA. Fueled by the addition of protons, the open to close stroke of the motor induced 32 +/- 3 mN/m compressive surface stress, which corresponds to a single motor force of approximately 11 pN/m, an order of magnitude larger than previous classical hybridization studies. Furthermore, the surface-tethered conformational change was found to be highly reversible, in contrast to classical DNA motors which typically suffer rapid system poisoning. The direction and amplitude of motor-induced cantilever motion was tuneable via control of buffer pH and ionic strength, indicating that electrostatic forces play an important role in stress generation. Hybrid devices which directly harness the multiple accessible conformational states of dynamic oligonucleotides and aptamers, translating biochemical energy into micromechanical work, present a radical new approach to the construction of "smart" nanoscale machinery and mechano-biosensors.

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Year:  2005        PMID: 16316252     DOI: 10.1021/ja0554514

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  16 in total

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Authors:  Sundus Erbas-Cakmak; David A Leigh; Charlie T McTernan; Alina L Nussbaumer
Journal:  Chem Rev       Date:  2015-09-08       Impact factor: 60.622

2.  Decoupling competing surface binding kinetics and reconfiguration of receptor footprint for ultrasensitive stress assays.

Authors:  Samadhan B Patil; Manuel Vögtli; Benjamin Webb; Giuseppe Mazza; Massimo Pinzani; Yeong-Ah Soh; Rachel A McKendry; Joseph W Ndieyira
Journal:  Nat Nanotechnol       Date:  2015-08-17       Impact factor: 39.213

3.  Molecular spiders with memory.

Authors:  Tibor Antal; P L Krapivsky
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2007-08-24

4.  Molecular Spiders in One Dimension.

Authors:  Tibor Antal; P L Krapivsky; Kirone Mallick
Journal:  J Stat Mech       Date:  2007-08-22       Impact factor: 2.231

5.  Programmable motion of DNA origami mechanisms.

Authors:  Alexander E Marras; Lifeng Zhou; Hai-Jun Su; Carlos E Castro
Journal:  Proc Natl Acad Sci U S A       Date:  2015-01-05       Impact factor: 11.205

Review 6.  Comparative advantages of mechanical biosensors.

Authors:  J L Arlett; E B Myers; M L Roukes
Journal:  Nat Nanotechnol       Date:  2011-03-27       Impact factor: 39.213

7.  Real-time detection of the morphological change in cellulose by a nanomechanical sensor.

Authors:  Liming Zhao; Ahmed Bulhassan; Guoliang Yang; Hai-Feng Ji; Jun Xi
Journal:  Biotechnol Bioeng       Date:  2010-09-01       Impact factor: 4.530

Review 8.  Multiscale assembly for tissue engineering and regenerative medicine.

Authors:  Sinan Guven; Pu Chen; Fatih Inci; Savas Tasoglu; Burcu Erkmen; Utkan Demirci
Journal:  Trends Biotechnol       Date:  2015-03-18       Impact factor: 19.536

9.  The parallel-stranded d(CGA) duplex is a highly predictable structural motif with two conformationally distinct strands.

Authors:  Emily M Luteran; Paul J Paukstelis
Journal:  Acta Crystallogr D Struct Biol       Date:  2022-02-18       Impact factor: 7.652

10.  Molecular motions in functional self-assembled nanostructures.

Authors:  Alexandre Dhotel; Ziguang Chen; Laurent Delbreilh; Boulos Youssef; Jean-Marc Saiter; Li Tan
Journal:  Int J Mol Sci       Date:  2013-01-24       Impact factor: 5.923

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