Literature DB >> 19079565

Molecular Spiders in One Dimension.

Tibor Antal1, P L Krapivsky, Kirone Mallick.   

Abstract

Molecular spiders are synthetic bio-molecular systems which have "legs" made of short single-stranded segments of DNA. Spiders move on a surface covered with single-stranded DNA segments complementary to legs. Different mappings are established between various models of spiders and simple exclusion processes. For spiders with simple gait and varying number of legs we compute the diffusion coefficient; when the hopping is biased we also compute their velocity.

Year:  2007        PMID: 19079565      PMCID: PMC2597816          DOI: 10.1088/1742-5468/2007/08/P08027

Source DB:  PubMed          Journal:  J Stat Mech        ISSN: 1742-5468            Impact factor:   2.231


  20 in total

1.  Single-file diffusion of colloids in one-dimensional channels

Authors: 
Journal:  Science       Date:  2000-01-28       Impact factor: 47.728

2.  Totally asymmetric exclusion process with extended objects: a model for protein synthesis.

Authors:  Leah B Shaw; R K P Zia; Kelvin H Lee
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2003-08-18

3.  Mean-field approaches to the totally asymmetric exclusion process with quenched disorder and large particles.

Authors:  Leah B Shaw; James P Sethna; Kelvin H Lee
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-08-04

4.  Probability of second law violations in shearing steady states.

Authors: 
Journal:  Phys Rev Lett       Date:  1993-10-11       Impact factor: 9.161

5.  Clustered bottlenecks in mRNA translation and protein synthesis.

Authors:  Tom Chou; Greg Lakatos
Journal:  Phys Rev Lett       Date:  2004-11-01       Impact factor: 9.161

6.  Disorder and nonconservation in a driven diffusive system.

Authors:  M R Evans; T Hanney; Y Kafri
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2004-12-15

7.  DNA molecular motor driven micromechanical cantilever arrays.

Authors:  Wenmiao Shu; Dongsheng Liu; Moyu Watari; Christian K Riener; Torsten Strunz; Mark E Welland; Shankar Balasubramanian; Rachel A McKendry
Journal:  J Am Chem Soc       Date:  2005-12-07       Impact factor: 15.419

8.  Behavior of polycatalytic assemblies in a substrate-displaying matrix.

Authors:  Renjun Pei; Steven K Taylor; Darko Stefanovic; Sergei Rudchenko; Tiffany E Mitchell; Milan N Stojanovic
Journal:  J Am Chem Soc       Date:  2006-10-04       Impact factor: 15.419

9.  Non-Abelian symmetries of stochastic processes: Derivation of correlation functions for random-vertex models and disordered-interacting-particle systems.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1994-04

10.  Equilibrium microstates which generate second law violating steady states.

Authors: 
Journal:  Phys Rev E Stat Phys Plasmas Fluids Relat Interdiscip Topics       Date:  1994-08
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  2 in total

1.  A bird's eye view tracking slow nanometer-scale movements of single molecular nano-assemblies.

Authors:  Nicole Michelotti; Chamaree de Silva; Alexander E Johnson-Buck; Anthony J Manzo; Nils G Walter
Journal:  Methods Enzymol       Date:  2010       Impact factor: 1.600

2.  Mutual Information Scaling for Tensor Network Machine Learning.

Authors:  Ian Convy; William Huggins; Haoran Liao; K Birgitta Whaley
Journal:  Mach Learn Sci Technol       Date:  2022-01-20
  2 in total

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