Literature DB >> 16314536

Activator Gcn4p and Cyc8p/Tup1p are interdependent for promoter occupancy at ARG1 in vivo.

Soon-Ja Kim1, Mark J Swanson, Hongfang Qiu, Chhabi K Govind, Alan G Hinnebusch.   

Abstract

The Cyc8p/Tup1p complex mediates repression of diverse genes in Saccharomyces cerevisiae and is recruited by DNA binding proteins specific for the different sets of repressed genes. By screening the yeast deletion library, we identified Cyc8p as a coactivator for Gcn4p, a transcriptional activator of amino acid biosynthetic genes. Deletion of CYC8 confers sensitivity to an inhibitor of isoleucine/valine biosynthesis and impairs activation of Gcn4p-dependent reporters and authentic amino acid biosynthetic target genes. Deletion of TUP1 produces similar but less severe activation defects in vivo. Although expression of Gcn4p is unaffected by deletion of CYC8, chromatin immunoprecipitation assays reveal a strong defect in binding of Gcn4p at the target genes ARG1 and ARG4 in cyc8Delta cells and to a lesser extent in tup1Delta cells. The defects in Gcn4p binding and transcriptional activation in cyc8Delta cells cannot be overcome by Gcn4p overexpression but are partially suppressed in tup1Delta cells. The impairment of Gcn4p binding in cyc8Delta and tup1Delta cells is severe enough to reduce recruitment of SAGA, Srb mediator, TATA binding protein, and RNA polymerase II to the ARG1 and ARG4 promoters, accounting for impaired transcriptional activation of these genes in both mutants. Cyc8p and Tup1p are recruited to the ARG1 and ARG4 promoters, consistent with a direct role for this complex in stimulating Gcn4p occupancy of the upstream activation sequence (UAS). Interestingly, Gcn4p also stimulates binding of Cyc8p/Tup1p at the 3' ends of these genes, raising the possibility that Cyc8p/Tup1p influences transcription elongation. Our findings reveal a novel coactivator function for Cyc8p/Tup1p at the level of activator binding and suggest that Gcn4p may enhance its own binding to the UAS by recruiting Cyc8p/Tup1p.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16314536      PMCID: PMC1316967          DOI: 10.1128/MCB.25.24.11171-11183.2005

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  52 in total

1.  Degradation of the transcription factor Gcn4 requires the kinase Pho85 and the SCF(CDC4) ubiquitin-ligase complex.

Authors:  A Meimoun; T Holtzman; Z Weissman; H J McBride; D J Stillman; G R Fink; D Kornitzer
Journal:  Mol Biol Cell       Date:  2000-03       Impact factor: 4.138

2.  TUP1 utilizes histone H3/H2B-specific HDA1 deacetylase to repress gene activity in yeast.

Authors:  J Wu; N Suka; M Carlson; M Grunstein
Journal:  Mol Cell       Date:  2001-01       Impact factor: 17.970

3.  Recruitment of the yeast Tup1p-Ssn6p repressor is associated with localized decreases in histone acetylation.

Authors:  J R Bone; S Y Roth
Journal:  J Biol Chem       Date:  2000-10-30       Impact factor: 5.157

4.  Ssn6-Tup1 interacts with class I histone deacetylases required for repression.

Authors:  A D Watson; D G Edmondson; J R Bone; Y Mukai; Y Yu; W Du; D J Stillman; S Y Roth
Journal:  Genes Dev       Date:  2000-11-01       Impact factor: 11.361

5.  Genetic analysis of the role of Pol II holoenzyme components in repression by the Cyc8-Tup1 corepressor in yeast.

Authors:  M Lee; S Chatterjee; K Struhl
Journal:  Genetics       Date:  2000-08       Impact factor: 4.562

6.  A new screen for protein interactions reveals that the Saccharomyces cerevisiae high mobility group proteins Nhp6A/B are involved in the regulation of the GAL1 promoter.

Authors:  H Laser; C Bongards; J Schüller; S Heck; N Johnsson; N Lehming
Journal:  Proc Natl Acad Sci U S A       Date:  2000-12-05       Impact factor: 11.205

7.  Gcn4 activator targets Gcn5 histone acetyltransferase to specific promoters independently of transcription.

Authors:  M H Kuo; E vom Baur; K Struhl; C D Allis
Journal:  Mol Cell       Date:  2000-12       Impact factor: 17.970

8.  Simultaneous recruitment of coactivators by Gcn4p stimulates multiple steps of transcription in vivo.

Authors:  Chhabi K Govind; Sungpil Yoon; Hongfang Qiu; Sudha Govind; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2005-07       Impact factor: 4.272

Review 9.  Turning genes off by Ssn6-Tup1: a conserved system of transcriptional repression in eukaryotes.

Authors:  R L Smith; A D Johnson
Journal:  Trends Biochem Sci       Date:  2000-07       Impact factor: 13.807

Review 10.  Mediator of transcriptional regulation.

Authors:  L C Myers; R D Kornberg
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

View more
  14 in total

1.  The Cyc8-Tup1 complex inhibits transcription primarily by masking the activation domain of the recruiting protein.

Authors:  Koon Ho Wong; Kevin Struhl
Journal:  Genes Dev       Date:  2011-12-01       Impact factor: 11.361

2.  The transcriptional coactivators SAGA, SWI/SNF, and mediator make distinct contributions to activation of glucose-repressed genes.

Authors:  Rhiannon K Biddick; G Lynn Law; Kevin Khaw Beng Chin; Elton T Young
Journal:  J Biol Chem       Date:  2008-09-30       Impact factor: 5.157

3.  Disrupting vesicular trafficking at the endosome attenuates transcriptional activation by Gcn4.

Authors:  Fan Zhang; Naseem A Gaur; Jiri Hasek; Soon-ja Kim; Hongfang Qiu; Mark J Swanson; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2008-09-15       Impact factor: 4.272

4.  Phosphoinositide [PI(3,5)P2] lipid-dependent regulation of the general transcriptional regulator Tup1.

Authors:  Bong-Kwan Han; Scott D Emr
Journal:  Genes Dev       Date:  2011-05-01       Impact factor: 11.361

5.  Regulation of amino acid, nucleotide, and phosphate metabolism in Saccharomyces cerevisiae.

Authors:  Per O Ljungdahl; Bertrand Daignan-Fornier
Journal:  Genetics       Date:  2012-03       Impact factor: 4.562

6.  Multiple histone deacetylases are recruited by corepressor Sin3 and contribute to gene repression mediated by Opi1 regulator of phospholipid biosynthesis in the yeast Saccharomyces cerevisiae.

Authors:  Mathias Grigat; Yvonne Jäschke; Felix Kliewe; Matthias Pfeifer; Susanne Walz; Hans-Joachim Schüller
Journal:  Mol Genet Genomics       Date:  2012-04-28       Impact factor: 3.291

7.  Individual subunits of the Ssn6-Tup11/12 corepressor are selectively required for repression of different target genes.

Authors:  Fredrik Fagerström-Billai; Mikaël Durand-Dubief; Karl Ekwall; Anthony P H Wright
Journal:  Mol Cell Biol       Date:  2006-11-13       Impact factor: 4.272

8.  Transcriptional profiling of cross pathway control in Neurospora crassa and comparative analysis of the Gcn4 and CPC1 regulons.

Authors:  Chaoguang Tian; Takao Kasuga; Matthew S Sachs; N Louise Glass
Journal:  Eukaryot Cell       Date:  2007-04-20

9.  Sumoylation controls the timing of Tup1-mediated transcriptional deactivation.

Authors:  Chong Han Ng; Akhi Akhter; Nathan Yurko; Justin M Burgener; Emanuel Rosonina; James L Manley
Journal:  Nat Commun       Date:  2015-03-13       Impact factor: 14.919

10.  Accumulation of a threonine biosynthetic intermediate attenuates general amino acid control by accelerating degradation of Gcn4 via Pho85 and Cdk8.

Authors:  Yashpal Rawal; Hongfang Qiu; Alan G Hinnebusch
Journal:  PLoS Genet       Date:  2014-07-31       Impact factor: 5.917

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.