Literature DB >> 15964818

Simultaneous recruitment of coactivators by Gcn4p stimulates multiple steps of transcription in vivo.

Chhabi K Govind1, Sungpil Yoon, Hongfang Qiu, Sudha Govind, Alan G Hinnebusch.   

Abstract

Transcriptional activation by Gcn4p is dependent on the coactivators SWI/SNF, SAGA, and Srb Mediator, which are recruited by Gcn4p and stimulate assembly of the pre-initiation complex (PIC) at the ARG1 promoter in vivo. We show that recruitment of all three coactivators is nearly simultaneous with binding of Gcn4p at ARG1 and is followed quickly by PIC formation and elongation by RNA polymerase II (Pol II) through the open reading frame. Despite the simultaneous recruitment of coactivators, rapid recruitment of SWI/SNF depends on the histone acetyltransferase (HAT) subunit of SAGA (Gcn5p), a non-HAT function of SAGA, and on Mediator. SAGA recruitment in turn is strongly stimulated by Mediator and the RSC complex. Recruitment of Mediator, by contrast, occurs independently of the other coactivators at ARG1. We confirm the roles of Mediator and SAGA in TATA binding protein (TBP) recruitment and demonstrate that all four coactivators under study enhance Pol II recruitment or promoter clearance following TBP binding. We also present evidence that SWI/SNF and SAGA stimulate transcription elongation downstream from the promoter. These functions can be limited to discrete time intervals, providing evidence for multiple stages in the induction process. Our findings reveal a program of coactivator recruitment and PIC assembly that distinguishes Gcn4p from other yeast activators studied thus far.

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Year:  2005        PMID: 15964818      PMCID: PMC1156971          DOI: 10.1128/MCB.25.13.5626-5638.2005

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  43 in total

1.  The Gcn5 bromodomain co-ordinates nucleosome remodelling.

Authors:  P Syntichaki; I Topalidou; G Thireos
Journal:  Nature       Date:  2000-03-23       Impact factor: 49.962

2.  Distinct classes of yeast promoters revealed by differential TAF recruitment.

Authors:  X Y Li; S R Bhaumik; M R Green
Journal:  Science       Date:  2000-05-19       Impact factor: 47.728

3.  The language of covalent histone modifications.

Authors:  B D Strahl; C D Allis
Journal:  Nature       Date:  2000-01-06       Impact factor: 49.962

4.  Transcriptional activation by Gcn4p involves independent interactions with the SWI/SNF complex and the SRB/mediator.

Authors:  K Natarajan; B M Jackson; H Zhou; F Winston; A G Hinnebusch
Journal:  Mol Cell       Date:  1999-10       Impact factor: 17.970

5.  A transcription reinitiation intermediate that is stabilized by activator.

Authors:  N Yudkovsky; J A Ranish; S Hahn
Journal:  Nature       Date:  2000-11-09       Impact factor: 49.962

6.  Dynamic association of capping enzymes with transcribing RNA polymerase II.

Authors:  S C Schroeder; B Schwer; S Shuman; D Bentley
Journal:  Genes Dev       Date:  2000-10-01       Impact factor: 11.361

7.  The Gcn4p activation domain interacts specifically in vitro with RNA polymerase II holoenzyme, TFIID, and the Adap-Gcn5p coactivator complex.

Authors:  C M Drysdale; B M Jackson; R McVeigh; E R Klebanow; Y Bai; T Kokubo; M Swanson; Y Nakatani; P A Weil; A G Hinnebusch
Journal:  Mol Cell Biol       Date:  1998-03       Impact factor: 4.272

8.  Genetic interactions between TFIIS and the Swi-Snf chromatin-remodeling complex.

Authors:  J K Davie; C M Kane
Journal:  Mol Cell Biol       Date:  2000-08       Impact factor: 4.272

9.  Global role for chromatin remodeling enzymes in mitotic gene expression.

Authors:  J E Krebs; C J Fry; M L Samuels; C L Peterson
Journal:  Cell       Date:  2000-09-01       Impact factor: 41.582

Review 10.  Mediator of transcriptional regulation.

Authors:  L C Myers; R D Kornberg
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

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  71 in total

1.  A role for Gcn5 in cardiomyocyte differentiation of rat mesenchymal stem cells.

Authors:  Li Li; Jing Zhu; Jie Tian; Xiaoyan Liu; Chuan Feng
Journal:  Mol Cell Biochem       Date:  2010-09-12       Impact factor: 3.396

2.  Mechanism of Mediator recruitment by tandem Gcn4 activation domains and three Gal11 activator-binding domains.

Authors:  Eric Herbig; Linda Warfield; Lisa Fish; James Fishburn; Bruce A Knutson; Beth Moorefield; Derek Pacheco; Steven Hahn
Journal:  Mol Cell Biol       Date:  2010-03-22       Impact factor: 4.272

3.  SUMO functions in constitutive transcription and during activation of inducible genes in yeast.

Authors:  Emanuel Rosonina; Sarah M Duncan; James L Manley
Journal:  Genes Dev       Date:  2010-05-26       Impact factor: 11.361

4.  TFIID and Spt-Ada-Gcn5-acetyltransferase functions probed by genome-wide synthetic genetic array analysis using a Saccharomyces cerevisiae taf9-ts allele.

Authors:  Elena Milgrom; Robert W West; Chen Gao; W-C Winston Shen
Journal:  Genetics       Date:  2005-08-22       Impact factor: 4.562

5.  Independent recruitment of mediator and SAGA by the activator Met4.

Authors:  Christophe Leroy; Laëtitia Cormier; Laurent Kuras
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

6.  The Spt4p subunit of yeast DSIF stimulates association of the Paf1 complex with elongating RNA polymerase II.

Authors:  Hongfang Qiu; Cuihua Hu; Chi-Ming Wong; Alan G Hinnebusch
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

7.  Selective requirement for SAGA in Hog1-mediated gene expression depending on the severity of the external osmostress conditions.

Authors:  Meritxell Zapater; Marc Sohrmann; Matthias Peter; Francesc Posas; Eulàlia de Nadal
Journal:  Mol Cell Biol       Date:  2007-04-02       Impact factor: 4.272

Review 8.  ATP-dependent chromatin remodeling factors and DNA damage repair.

Authors:  Mary Ann Osley; Toyoko Tsukuda; Jac A Nickoloff
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

9.  A Mediator subunit, MDT-15, integrates regulation of fatty acid metabolism by NHR-49-dependent and -independent pathways in C. elegans.

Authors:  Stefan Taubert; Marc R Van Gilst; Malene Hansen; Keith R Yamamoto
Journal:  Genes Dev       Date:  2006-05-01       Impact factor: 11.361

10.  The TAF9 C-terminal conserved region domain is required for SAGA and TFIID promoter occupancy to promote transcriptional activation.

Authors:  Malika Saint; Sonal Sawhney; Ishani Sinha; Rana Pratap Singh; Rashmi Dahiya; Anushikha Thakur; Rahul Siddharthan; Krishnamurthy Natarajan
Journal:  Mol Cell Biol       Date:  2014-02-18       Impact factor: 4.272

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