Literature DB >> 16309622

Stereochemistry and deuterium isotope effects associated with the cyclization-rearrangements catalyzed by tobacco epiaristolochene and hyoscyamus premnaspirodiene synthases, and the chimeric CH4 hybrid cyclase.

David J Schenk1, Courtney M Starks, Kathleen Rising Manna, Joe Chappell, Joseph P Noel, Robert M Coates.   

Abstract

Tobacco epiaristolochene and hyoscyamus premnaspirodiene synthases (TEAS and HPS) catalyze the cyclizations and rearrangements of (E,E)-farnesyl diphosphate (FPP) to the corresponding bicyclic sesquiterpene hydrocarbons. The complex mechanism proceeds through a tightly bound (R)-germacrene A intermediate and involves partitioning of a common eudesm-5-yl carbocation either by angular methyl migration, or by C-9 methylene rearrangement, to form the respective eremophilane and spirovetivane structures. In this work, the stereochemistry and timing of the proton addition and elimination steps in the mechanism were investigated by synthesis of substrates bearing deuterium labels in one or both terminal methyl groups, and in the pro-S and pro-R methylene hydrogens at C-8. Incubations of the labeled FPPs with recombinant TEAS and HPS, and with the chimeric CH4 hybrid cyclase having catalytic activities of both TEAS and HPS, and of unlabeled FPP in D2O, together with gas chromatography-mass spectrometry (GC-MS) and/or NMR analyses of the labeled products gave the following results: (1) stereospecific CH3-->CH2 eliminations at the cis-terminal methyl in all cases; (2) similar primary kinetic isotope effects (KIE) of 4.25-4.64 for the CH3-->CH2 eliminations; (3) a significant intermolecular KIE (1.33+/-0.03) in competitive cyclizations of unlabeled FPP and FPP-d6 to premnaspirodiene by HPS; (4) stereoselective incorporation of label from D2O into the 1beta position of epiaristolochene; (5) stereoselective eliminations of the 1beta and 9beta protons in formation of epiaristolochene and its delta(1(10)) isomer epieremophilene by TEAS and CH4; and (6) predominant loss of the 1alpha proton in forming the cyclohexene double bond of premnaspirodiene by HPS and CH4. The results are explained by consideration of the conformations of individual intermediates, and by imposing the requirement of stereoelectronically favorable proton additions and eliminations.

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Year:  2005        PMID: 16309622      PMCID: PMC2883252          DOI: 10.1016/j.abb.2005.09.002

Source DB:  PubMed          Journal:  Arch Biochem Biophys        ISSN: 0003-9861            Impact factor:   4.013


  16 in total

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2.  Pre-steady-state study of recombinant sesquiterpene cyclases.

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5.  Nature of hydrogen transfer in soybean lipoxygenase 1: separation of primary and secondary isotope effects.

Authors:  K W Rickert; J P Klinman
Journal:  Biochemistry       Date:  1999-09-21       Impact factor: 3.162

6.  Intramolecular proton transfer in the cyclization of geranylgeranyl diphosphate to the taxadiene precursor of taxol catalyzed by recombinant taxadiene synthase.

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Journal:  Chem Biol       Date:  2000-12

7.  Stereochemistry of the macrocyclization and elimination steps in taxadiene biosynthesis through deuterium labeling.

Authors:  Qingwu Jin; David C Williams; Mehri Hezari; Rodney Croteau; Robert M Coates
Journal:  J Org Chem       Date:  2005-06-10       Impact factor: 4.354

8.  Monoterpene biosynthesis: isotope effects associated with bicyclic olefin formation catalyzed by pinene synthases from sage (Salvia officinalis).

Authors:  K C Wagschal; H J Pyun; R M Coates; R Croteau
Journal:  Arch Biochem Biophys       Date:  1994-02-01       Impact factor: 4.013

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Authors:  K Back; S Yin; J Chappell
Journal:  Arch Biochem Biophys       Date:  1994-12       Impact factor: 4.013

10.  Mechanism of taxadiene synthase, a diterpene cyclase that catalyzes the first step of taxol biosynthesis in Pacific yew.

Authors:  X Lin; M Hezari; A E Koepp; H G Floss; R Croteau
Journal:  Biochemistry       Date:  1996-03-05       Impact factor: 3.162

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  8 in total

1.  Effect of isotopically sensitive branching on product distribution for pentalenene synthase: support for a mechanism predicted by quantum chemistry.

Authors:  Liansuo Zu; Meimei Xu; Michael W Lodewyk; David E Cane; Reuben J Peters; Dean J Tantillo
Journal:  J Am Chem Soc       Date:  2012-07-09       Impact factor: 15.419

Review 2.  Structural and Chemical Biology of Terpenoid Cyclases.

Authors:  David W Christianson
Journal:  Chem Rev       Date:  2017-08-25       Impact factor: 60.622

3.  Sesquiterpene synthases Cop4 and Cop6 from Coprinus cinereus: catalytic promiscuity and cyclization of farnesyl pyrophosphate geometric isomers.

Authors:  Fernando Lopez-Gallego; Sean A Agger; Daniel Abate-Pella; Mark D Distefano; Claudia Schmidt-Dannert
Journal:  Chembiochem       Date:  2010-05-17       Impact factor: 3.164

4.  Four New Highly Oxygenated Eremophilane Sesquiterpenes from an Endophytic Fungus Boeremia exigua Isolated from Fritillaria hupehensis.

Authors:  Hong-Lian Ai; Xiao Lv; Ke Ye; Meng-Xi Wang; Rong Huang; Bao-Bao Shi; Zheng-Hui Li
Journal:  J Fungi (Basel)       Date:  2022-05-08

5.  Biosynthesis of the sesquiterpene antibiotic albaflavenone in Streptomyces coelicolor. Mechanism and stereochemistry of the enzymatic formation of epi-isozizaene.

Authors:  Xin Lin; David E Cane
Journal:  J Am Chem Soc       Date:  2009-05-13       Impact factor: 15.419

Review 6.  Unearthing the roots of the terpenome.

Authors:  David W Christianson
Journal:  Curr Opin Chem Biol       Date:  2008-02-20       Impact factor: 8.822

7.  Sesquiterpene Synthase-Catalysed Formation of a New Medium-Sized Cyclic Terpenoid Ether from Farnesyl Diphosphate Analogues.

Authors:  Florence Huynh; Daniel J Grundy; Robert L Jenkins; David J Miller; Rudolf K Allemann
Journal:  Chembiochem       Date:  2018-07-16       Impact factor: 3.164

8.  Interception of the enzymatic conversion of farnesyl diphosphate to 5-epi-aristolochene by using a fluoro substrate analogue: 1-fluorogermacrene A from (2E,6Z)-6-fluorofarnesyl diphosphate.

Authors:  Juan A Faraldos; Yuxin Zhao; Paul E O'Maille; Joseph P Noel; Robert M Coates
Journal:  Chembiochem       Date:  2007-10-15       Impact factor: 3.164

  8 in total

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