Literature DB >> 18249199

Unearthing the roots of the terpenome.

David W Christianson1.   

Abstract

Although terpenoid synthases catalyze the most complex reactions in biology, these enzymes appear to play little role in the chemistry of catalysis other than to trigger the ionization and chaperone the conformation of flexible isoprenoid substrates and carbocation intermediates through multistep reaction cascades. Fidelity and promiscuity in this chemistry (whether a terpenoid synthase generates one or several products), depends on the permissiveness of the active site template in chaperoning each step of an isoprenoid coupling or cyclization reaction. Structure-guided mutagenesis studies of terpenoid synthases such as farnesyl diphosphate synthase, 5-epi-aristolochene synthase, and gamma-humulene synthase suggest that the vast diversity of terpenoid natural products is rooted in the facile evolution of alpha-helical folds shared by terpenoid synthases in all forms of life.

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Year:  2008        PMID: 18249199      PMCID: PMC2430190          DOI: 10.1016/j.cbpa.2007.12.008

Source DB:  PubMed          Journal:  Curr Opin Chem Biol        ISSN: 1367-5931            Impact factor:   8.822


  51 in total

1.  Enzyme Mechanisms for Polycyclic Triterpene Formation.

Authors: 
Journal:  Angew Chem Int Ed Engl       Date:  2000-08-18       Impact factor: 15.336

2.  Pre-steady-state kinetic analysis of the trichodiene synthase reaction pathway.

Authors:  D E Cane; H T Chiu; P H Liang; K S Anderson
Journal:  Biochemistry       Date:  1997-07-08       Impact factor: 3.162

3.  Pre-steady-state study of recombinant sesquiterpene cyclases.

Authors:  J R Mathis; K Back; C Starks; J Noel; C D Poulter; J Chappell
Journal:  Biochemistry       Date:  1997-07-08       Impact factor: 3.162

4.  Chimeras of two isoprenoid synthases catalyze all four coupling reactions in isoprenoid biosynthesis.

Authors:  Hirekodathakallu V Thulasiram; Hans K Erickson; C Dale Poulter
Journal:  Science       Date:  2007-04-06       Impact factor: 47.728

5.  Crystal structure of protein farnesyltransferase at 2.25 angstrom resolution.

Authors:  H W Park; S R Boduluri; J F Moomaw; P J Casey; L S Beese
Journal:  Science       Date:  1997-03-21       Impact factor: 47.728

6.  Conversion from farnesyl diphosphate synthase to geranylgeranyl diphosphate synthase by random chemical mutagenesis.

Authors:  S Ohnuma; T Nakazawa; H Hemmi; A M Hallberg; T Koyama; K Ogura; T Nishino
Journal:  J Biol Chem       Date:  1996-04-26       Impact factor: 5.157

7.  Molecular recognition of the substrate diphosphate group governs product diversity in trichodiene synthase mutants.

Authors:  L Sangeetha Vedula; Michael J Rynkiewicz; Hyung-Jung Pyun; Robert M Coates; David E Cane; David W Christianson
Journal:  Biochemistry       Date:  2005-04-26       Impact factor: 3.162

8.  Theoretical studies on farnesyl cation cyclization: pathways to pentalenene.

Authors:  Pradeep Gutta; Dean J Tantillo
Journal:  J Am Chem Soc       Date:  2006-05-10       Impact factor: 15.419

9.  Enzymes encoded by the farnesyl diphosphate synthase gene family in the Big Sagebrush Artemisia tridentata ssp. spiciformis.

Authors:  Andrea Hemmerlin; Susan B Rivera; Hans K Erickson; C Dale Poulter
Journal:  J Biol Chem       Date:  2003-06-02       Impact factor: 5.157

Review 10.  Chain elongation in the isoprenoid biosynthetic pathway.

Authors:  B A Kellogg; C D Poulter
Journal:  Curr Opin Chem Biol       Date:  1997-12       Impact factor: 8.822

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  95 in total

1.  Combining metabolic and protein engineering of a terpenoid biosynthetic pathway for overproduction and selectivity control.

Authors:  Effendi Leonard; Parayil Kumaran Ajikumar; Kelly Thayer; Wen-Hai Xiao; Jeffrey D Mo; Bruce Tidor; Gregory Stephanopoulos; Kristala L J Prather
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-19       Impact factor: 11.205

2.  Selectivity of fungal sesquiterpene synthases: role of the active site's H-1 alpha loop in catalysis.

Authors:  Fernando López-Gallego; Grayson T Wawrzyn; Claudia Schmidt-Dannert
Journal:  Appl Environ Microbiol       Date:  2010-10-01       Impact factor: 4.792

Review 3.  Something Old, Something New: Conserved Enzymes and the Evolution of Novelty in Plant Specialized Metabolism.

Authors:  Gaurav D Moghe; Robert L Last
Journal:  Plant Physiol       Date:  2015-08-14       Impact factor: 8.340

4.  Combinatorial biosynthesis and the basis for substrate promiscuity in class I diterpene synthases.

Authors:  Meirong Jia; Sambit K Mishra; Samuel Tufts; Robert L Jernigan; Reuben J Peters
Journal:  Metab Eng       Date:  2019-06-17       Impact factor: 9.783

5.  Biomimetic Platinum-Promoted Polyene Polycyclizations: Influence of Alkene Substitution and Pre-cyclization Conformations.

Authors:  Christina H McCulley; Michael J Geier; Brandi M Hudson; Michel R Gagné; Dean J Tantillo
Journal:  J Am Chem Soc       Date:  2017-08-03       Impact factor: 15.419

Review 6.  Engineering synthetic recursive pathways to generate non-natural small molecules.

Authors:  Elizabeth A Felnagle; Asha Chaubey; Elizabeth L Noey; Kendall N Houk; James C Liao
Journal:  Nat Chem Biol       Date:  2012-05-17       Impact factor: 15.040

7.  Computational-guided discovery and characterization of a sesquiterpene synthase from Streptomyces clavuligerus.

Authors:  Jeng-Yeong Chow; Bo-Xue Tian; Gurusankar Ramamoorthy; Brandan S Hillerich; Ronald D Seidel; Steven C Almo; Matthew P Jacobson; C Dale Poulter
Journal:  Proc Natl Acad Sci U S A       Date:  2015-04-21       Impact factor: 11.205

8.  Genome of Diaporthe sp. provides insights into the potential inter-phylum transfer of a fungal sesquiterpenoid biosynthetic pathway.

Authors:  Jose Guedes de Sena Filho; Maureen B Quin; Daniel J Spakowicz; Jeffrey J Shaw; Kaury Kucera; Brian Dunican; Scott A Strobel; Claudia Schmidt-Dannert
Journal:  Fungal Biol       Date:  2016-04-12

Review 9.  Terpenoid synthase structures: a so far incomplete view of complex catalysis.

Authors:  Yang Gao; Richard B Honzatko; Reuben J Peters
Journal:  Nat Prod Rep       Date:  2012-08-21       Impact factor: 13.423

10.  Nonseed plant Selaginella moellendorffi [corrected] has both seed plant and microbial types of terpene synthases.

Authors:  Guanglin Li; Tobias G Köllner; Yanbin Yin; Yifan Jiang; Hao Chen; Ying Xu; Jonathan Gershenzon; Eran Pichersky; Feng Chen
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-20       Impact factor: 11.205

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