Literature DB >> 16263340

DNA polymerase iota-dependent translesion replication of uracil containing cyclobutane pyrimidine dimers.

Alexandra Vaisman1, Kohei Takasawa, Shigenori Iwai, Roger Woodgate.   

Abstract

Analysis of the spectrum of UV-induced mutations generated in synchronized wild-type S-phase cells reveals that only approximately 25% of mutations occur at thymine (T), whilst 75% are targeted to cytosine (C). The mutational spectra changes dramatically in XP-V cells, devoid of poleta, where approximately 45% of mutations occur at Ts and approximately 55% at Cs. At the present time, it is unclear whether the C-->T mutations actually represent true misincorporations opposite C, or perhaps occur as the result of the correct incorporation of adenine (A) opposite a C in a UV-photoproduct that had undergone deamination to uracil (U). In order to assess the role that human poliota might play, if any, in the replicative bypass of such UV-photoproducts, we have analyzed the efficiency and fidelity of pol iota-dependent bypass of a T-U cyclobutane pyrimidine dimer (CPD) in vitro. Interestingly, pol iota-dependent bypass of a T-U CPD occurs more efficiently than that of a corresponding T-T CPD. Guanine (G) was misincorporated opposite the 3'U of the T-U CPD only two-fold less frequently than the correct Watson-Crick base, A. While pol iota generally extended the G:3'U-CPD mispairs less efficiently than the correctly paired primer, pol iota-dependent extension was equal to, or greater than that observed with human pols eta and kappa and S. cerevisiae pol zeta under the same assay conditions. Thus, we hypothesize that the ability of pol iota to bypass T-U CPDs through the frequent misincorporation of G opposite the 3'U of the CPD, may provide a mechanism whereby human cells can decrease the mutagenic potential of these lesions.

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Year:  2005        PMID: 16263340     DOI: 10.1016/j.dnarep.2005.09.011

Source DB:  PubMed          Journal:  DNA Repair (Amst)        ISSN: 1568-7856


  12 in total

1.  Participation of mouse DNA polymerase iota in strand-biased mutagenic bypass of UV photoproducts and suppression of skin cancer.

Authors:  Chad A Dumstorf; Alan B Clark; Qingcong Lin; Grace E Kissling; Tao Yuan; Raju Kucherlapati; W Glenn McGregor; Thomas A Kunkel
Journal:  Proc Natl Acad Sci U S A       Date:  2006-11-17       Impact factor: 11.205

Review 2.  Translesion DNA polymerases in eukaryotes: what makes them tick?

Authors:  Alexandra Vaisman; Roger Woodgate
Journal:  Crit Rev Biochem Mol Biol       Date:  2017-03-09       Impact factor: 8.250

Review 3.  Translesion DNA synthesis and mutagenesis in eukaryotes.

Authors:  Julian E Sale
Journal:  Cold Spring Harb Perspect Biol       Date:  2013-03-01       Impact factor: 10.005

4.  UV-B radiation induces epithelial tumors in mice lacking DNA polymerase eta and mesenchymal tumors in mice deficient for DNA polymerase iota.

Authors:  Tsuyoshi Ohkumo; Yuji Kondo; Masayuki Yokoi; Tetsuya Tsukamoto; Ayumi Yamada; Taiki Sugimoto; Rie Kanao; Yujiro Higashi; Hisato Kondoh; Masae Tatematsu; Chikahide Masutani; Fumio Hanaoka
Journal:  Mol Cell Biol       Date:  2006-08-05       Impact factor: 4.272

5.  Accommodation of an N-(deoxyguanosin-8-yl)-2-acetylaminofluorene adduct in the active site of human DNA polymerase iota: Hoogsteen or Watson-Crick base pairing?

Authors:  Kerry Donny-Clark; Robert Shapiro; Suse Broyde
Journal:  Biochemistry       Date:  2009-01-13       Impact factor: 3.162

6.  Detrimental effects of UV-B radiation in a xeroderma pigmentosum-variant cell line.

Authors:  Kimberly N Herman; Shannon Toffton; Scott D McCulloch
Journal:  Environ Mol Mutagen       Date:  2014-02-18       Impact factor: 3.216

Review 7.  Mysterious and fascinating: DNA polymerase ɩ remains enigmatic 20 years after its discovery.

Authors:  Alexandra Vaisman; Roger Woodgate
Journal:  DNA Repair (Amst)       Date:  2020-09

8.  Replication across regioisomeric ethylated thymidine lesions by purified DNA polymerases.

Authors:  Nisana Andersen; Pengcheng Wang; Yinsheng Wang
Journal:  Chem Res Toxicol       Date:  2013-11-01       Impact factor: 3.739

9.  Inaccurate DNA synthesis in cell extracts of yeast producing active human DNA polymerase iota.

Authors:  Alena V Makarova; Corinn Grabow; Leonid V Gening; Vyacheslav Z Tarantul; Tahir H Tahirov; Tadayoshi Bessho; Youri I Pavlov
Journal:  PLoS One       Date:  2011-01-31       Impact factor: 3.240

10.  Biochemical and photochemical mechanisms that produce different UV-induced mutation spectra.

Authors:  Tomohiko Sugiyama; Brianna Keinard; Griffin Best; Mahima R Sanyal
Journal:  Mutat Res       Date:  2021-09-17       Impact factor: 3.151

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