Literature DB >> 16251353

DNA replication origins fire stochastically in fission yeast.

Prasanta K Patel1, Benoit Arcangioli, Stephen P Baker, Aaron Bensimon, Nicholas Rhind.   

Abstract

DNA replication initiates at discrete origins along eukaryotic chromosomes. However, in most organisms, origin firing is not efficient; a specific origin will fire in some but not all cell cycles. This observation raises the question of how individual origins are selected to fire and whether origin firing is globally coordinated to ensure an even distribution of replication initiation across the genome. We have addressed these questions by determining the location of firing origins on individual fission yeast DNA molecules using DNA combing. We show that the firing of replication origins is stochastic, leading to a random distribution of replication initiation. Furthermore, origin firing is independent between cell cycles; there is no epigenetic mechanism causing an origin that fires in one cell cycle to preferentially fire in the next. Thus, the fission yeast strategy for the initiation of replication is different from models of eukaryotic replication that propose coordinated origin firing.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16251353      PMCID: PMC1345668          DOI: 10.1091/mbc.e05-07-0657

Source DB:  PubMed          Journal:  Mol Biol Cell        ISSN: 1059-1524            Impact factor:   4.138


  51 in total

1.  Activation of dormant origins of DNA replication in budding yeast.

Authors:  C Santocanale; K Sharma; J F Diffley
Journal:  Genes Dev       Date:  1999-09-15       Impact factor: 11.361

2.  Mechanisms ensuring rapid and complete DNA replication despite random initiation in Xenopus early embryos.

Authors:  I Lucas; M Chevrier-Miller; J M Sogo; O Hyrien
Journal:  J Mol Biol       Date:  2000-02-25       Impact factor: 5.469

Review 3.  Flexibility and governance in eukaryotic DNA replication.

Authors:  Etienne Schwob
Journal:  Curr Opin Microbiol       Date:  2004-12       Impact factor: 7.934

4.  Activation of silent replication origins at autonomously replicating sequence elements near the HML locus in budding yeast.

Authors:  M Vujcic; C A Miller; D Kowalski
Journal:  Mol Cell Biol       Date:  1999-09       Impact factor: 4.272

5.  Large, complex modular structure of a fission yeast DNA replication origin.

Authors:  D D Dubey; S M Kim; I T Todorov; J A Huberman
Journal:  Curr Biol       Date:  1996-04-01       Impact factor: 10.834

6.  Chromosomal ARS1 has a single leading strand start site.

Authors:  A K Bielinsky; S A Gerbi
Journal:  Mol Cell       Date:  1999-04       Impact factor: 17.970

7.  Organization of DNA replication origins in the fission yeast genome.

Authors:  M Gómez; F Antequera
Journal:  EMBO J       Date:  1999-10-15       Impact factor: 11.598

8.  Measurement of nuclear DNA content in fission yeast by flow cytometry.

Authors:  C R Carlson; B Grallert; R Bernander; T Stokke; E Boye
Journal:  Yeast       Date:  1997-11       Impact factor: 3.239

9.  A Mec1- and Rad53-dependent checkpoint controls late-firing origins of DNA replication.

Authors:  C Santocanale; J F Diffley
Journal:  Nature       Date:  1998-10-08       Impact factor: 49.962

10.  Genetic analysis of an ARS element from the fission yeast Schizosaccharomyces pombe.

Authors:  R K Clyne; T J Kelly
Journal:  EMBO J       Date:  1995-12-15       Impact factor: 11.598

View more
  101 in total

1.  Mrc1 marks early-firing origins and coordinates timing and efficiency of initiation in fission yeast.

Authors:  Motoshi Hayano; Yutaka Kanoh; Seiji Matsumoto; Hisao Masai
Journal:  Mol Cell Biol       Date:  2011-04-25       Impact factor: 4.272

Review 2.  Organization of DNA replication.

Authors:  Vadim O Chagin; Jeffrey H Stear; M Cristina Cardoso
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-04       Impact factor: 10.005

3.  DNA replication timing: random thoughts about origin firing.

Authors:  Nicholas Rhind
Journal:  Nat Cell Biol       Date:  2006-12       Impact factor: 28.824

4.  Ordered assembly of Sld3, GINS and Cdc45 is distinctly regulated by DDK and CDK for activation of replication origins.

Authors:  Hayato Yabuuchi; Yoshiki Yamada; Tomonori Uchida; Tul Sunathvanichkul; Takuro Nakagawa; Hisao Masukata
Journal:  EMBO J       Date:  2006-09-21       Impact factor: 11.598

Review 5.  The elusive determinants of replication origins.

Authors:  Silvia Costa; J Julian Blow
Journal:  EMBO Rep       Date:  2007-04       Impact factor: 8.807

6.  Replication foci dynamics: replication patterns are modulated by S-phase checkpoint kinases in fission yeast.

Authors:  Peter Meister; Angela Taddei; Aaron Ponti; Giuseppe Baldacci; Susan M Gasser
Journal:  EMBO J       Date:  2007-02-15       Impact factor: 11.598

7.  Cdc6 ATPase activity regulates ORC x Cdc6 stability and the selection of specific DNA sequences as origins of DNA replication.

Authors:  Christian Speck; Bruce Stillman
Journal:  J Biol Chem       Date:  2007-02-21       Impact factor: 5.157

8.  Conserved forkhead dimerization motif controls DNA replication timing and spatial organization of chromosomes in S. cerevisiae.

Authors:  A Zachary Ostrow; Reza Kalhor; Yan Gan; Sandra K Villwock; Christian Linke; Matteo Barberis; Lin Chen; Oscar M Aparicio
Journal:  Proc Natl Acad Sci U S A       Date:  2017-03-06       Impact factor: 11.205

9.  Mathematical modeling of genome replication.

Authors:  Renata Retkute; Conrad A Nieduszynski; Alessandro de Moura
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2012-09-17

10.  Molecular analysis of the replication program in unicellular model organisms.

Authors:  M K Raghuraman; Bonita J Brewer
Journal:  Chromosome Res       Date:  2010-01       Impact factor: 5.239

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.