Literature DB >> 16246141

Nucleolar biogenesis: the first small steps.

J-L Prieto1, B McStay.   

Abstract

The nucleolus is the site of rRNA transcription, pre-rRNA processing and ribosome subunit assembly. The nucleolus assembles around clusters of ribosomal gene repeats during late telophase, persists throughout interphase and then disassembles as cells enter mitosis. The initial step in nucleolar formation is ribosomal gene transcription, which is mediated by Pol I (RNA polymerase I) and its associated transcription factors: UBF (upstream-binding factor), SL1 (selectivity factor) and TIF-IA (transcription initiation factor IA)/Rrn3. Ribosomal gene clusters, termed NORs (nucleolar organizer regions), are found on each of the five human acrocentric chromosomes. Though transcription is repressed during metaphase, NORs that were active in the previous interphase form prominent cytogenetic features, namely secondary constrictions. The main defining characteristic of these constrictions is under-condensation in comparison with the rest of the chromosome. Extensive binding of UBF over the ribosomal gene repeat is responsible for the formation of this chromosomal feature. During interphase, the majority of the Pol I transcription machinery, though present in nucleoli, is not actively engaged in transcription. Interaction with UBF bound across the gene repeat provides an explanation for how this non-engaged Pol I machinery is sequestered by nucleoli.

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Year:  2005        PMID: 16246141     DOI: 10.1042/BST20051441

Source DB:  PubMed          Journal:  Biochem Soc Trans        ISSN: 0300-5127            Impact factor:   5.407


  24 in total

Review 1.  Nucleolar DNA: the host and the guests.

Authors:  E Smirnov; D Cmarko; T Mazel; M Hornáček; I Raška
Journal:  Histochem Cell Biol       Date:  2016-02-04       Impact factor: 4.304

Review 2.  rRNA gene silencing and nucleolar dominance: insights into a chromosome-scale epigenetic on/off switch.

Authors:  Sasha Preuss; Craig S Pikaard
Journal:  Biochim Biophys Acta       Date:  2007-03-12

Review 3.  The small subunit processome in ribosome biogenesis—progress and prospects.

Authors:  Kathleen R Phipps; J Michael Charette; Susan J Baserga
Journal:  Wiley Interdiscip Rev RNA       Date:  2011 Jan-Feb       Impact factor: 9.957

Review 4.  Structure and epigenetics of nucleoli in comparison with non-nucleolar compartments.

Authors:  Eva Bártová; Andrea Harnicarová Horáková; Radka Uhlírová; Ivan Raska; Gabriela Galiová; Darya Orlova; Stanislav Kozubek
Journal:  J Histochem Cytochem       Date:  2009-12-21       Impact factor: 2.479

5.  Ribosomal DNA integrating rAAV-rDNA vectors allow for stable transgene expression.

Authors:  Leszek Lisowski; Ashley Lau; Zhongya Wang; Yue Zhang; Feijie Zhang; Markus Grompe; Mark A Kay
Journal:  Mol Ther       Date:  2012-09-18       Impact factor: 11.454

6.  Chromosomes at Work: Organization of Chromosome Territories in the Interphase Nucleus.

Authors:  Andrew J Fritz; A Rasim Barutcu; Lori Martin-Buley; André J van Wijnen; Sayyed K Zaidi; Anthony N Imbalzano; Jane B Lian; Janet L Stein; Gary S Stein
Journal:  J Cell Biochem       Date:  2016-01       Impact factor: 4.429

7.  Integration of Insulin receptor/Foxo signaling and dMyc activity during muscle growth regulates body size in Drosophila.

Authors:  Fabio Demontis; Norbert Perrimon
Journal:  Development       Date:  2009-02-11       Impact factor: 6.868

Review 8.  The yin and yang of chromatin spatial organization.

Authors:  Nathan F Cope; Peter Fraser; Christopher H Eskiw
Journal:  Genome Biol       Date:  2010-03-29       Impact factor: 13.583

9.  PHD finger protein 2 (PHF2) represses ribosomal RNA gene transcription by antagonizing PHF finger protein 8 (PHF8) and recruiting methyltransferase SUV39H1.

Authors:  Guang Shi; Meng Wu; Lan Fang; Fang Yu; Shimeng Cheng; Jiwen Li; James X Du; Jiemin Wong
Journal:  J Biol Chem       Date:  2014-09-09       Impact factor: 5.157

10.  Non-Random Patterns in the Distribution of NOR-Bearing Chromosome Territories in Human Fibroblasts: A Network Model of Interactions.

Authors:  Artem Pliss; Andrew J Fritz; Branislav Stojkovic; Hu Ding; Lopamudra Mukherjee; Sambit Bhattacharya; Jinhui Xu; Ronald Berezney
Journal:  J Cell Physiol       Date:  2015-02       Impact factor: 6.384

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