Literature DB >> 16240113

Combined NMR-observation of cold denaturation in supercooled water and heat denaturation enables accurate measurement of deltaC(p) of protein unfolding.

Thomas Szyperski1, Jeffrey L Mills, Dieter Perl, Jochen Balbach.   

Abstract

Cold and heat denaturation of the double mutant Arg 3-->Glu/Leu 66-->Glu of cold shock protein Csp of Bacillus caldolyticus was monitored using 1D (1)H NMR spectroscopy in the temperature range from -12 degrees C in supercooled water up to +70 degrees C. The fraction of unfolded protein, f (u), was determined as a function of the temperature. The data characterizing the unfolding transitions could be consistently interpreted in the framework of two-state models: cold and heat denaturation temperatures were determined to be -11 degrees C and 39 degrees C, respectively. A joint fit to both cold and heat transition data enabled the accurate spectroscopic determination of the heat capacity difference between native and denatured state, DeltaC(p) of unfolding. The approach described in this letter, or a variant thereof, is generally applicable and promises to be of value for routine studies of protein folding.

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Year:  2005        PMID: 16240113     DOI: 10.1007/s00249-005-0028-4

Source DB:  PubMed          Journal:  Eur Biophys J        ISSN: 0175-7571            Impact factor:   1.733


  19 in total

1.  Thermal stability and atomic-resolution crystal structure of the Bacillus caldolyticus cold shock protein.

Authors:  U Mueller; D Perl; F X Schmid; U Heinemann
Journal:  J Mol Biol       Date:  2000-04-07       Impact factor: 5.469

Review 2.  Stability and stabilization of globular proteins in solution.

Authors:  R Jaenicke
Journal:  J Biotechnol       Date:  2000-05-26       Impact factor: 3.307

3.  Protein dynamics in supercooled water: the search for slow motional modes.

Authors:  Jeffrey L Mills; Thomas Szyperski
Journal:  J Biomol NMR       Date:  2002-05       Impact factor: 2.835

4.  Calorimetric study of the heat and cold denaturation of beta-lactoglobulin.

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Journal:  Biochemistry       Date:  1992-09-22       Impact factor: 3.162

Review 5.  Cold denaturation of proteins.

Authors:  P L Privalov
Journal:  Crit Rev Biochem Mol Biol       Date:  1990       Impact factor: 8.250

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Authors:  P L Privalov; V P Kutyshenko
Journal:  J Mol Biol       Date:  1986-08-05       Impact factor: 5.469

7.  NMR spectroscopy of hydroxyl protons in supercooled carbohydrates.

Authors:  L Poppe; H van Halbeek
Journal:  Nat Struct Biol       Date:  1994-04

8.  Two folded conformers of ubiquitin revealed by high-pressure NMR.

Authors:  R Kitahara; H Yamada; K Akasaka
Journal:  Biochemistry       Date:  2001-11-13       Impact factor: 3.162

9.  Native-like beta-hairpin retained in the cold-denatured state of bovine beta-lactoglobulin.

Authors:  H Katou; M Hoshino; H Kamikubo; C A Batt; Y Goto
Journal:  J Mol Biol       Date:  2001-07-06       Impact factor: 5.469

10.  Low-temperature unfolding of a mutant of phage T4 lysozyme. 1. Equilibrium studies.

Authors:  B L Chen; J A Schellman
Journal:  Biochemistry       Date:  1989-01-24       Impact factor: 3.162

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  17 in total

Review 1.  NMR-based structural biology of proteins in supercooled water.

Authors:  Thomas Szyperski; Jeffrey L Mills
Journal:  J Struct Funct Genomics       Date:  2011-05-01

2.  High-pressure NMR reveals close similarity between cold and alcohol protein denaturation in ubiquitin.

Authors:  Navratna Vajpai; Lydia Nisius; Maciej Wiktor; Stephan Grzesiek
Journal:  Proc Natl Acad Sci U S A       Date:  2013-01-02       Impact factor: 11.205

3.  The cold denatured state of the C-terminal domain of protein L9 is compact and contains both native and non-native structure.

Authors:  Bing Shan; Sebastian McClendon; Carla Rospigliosi; David Eliezer; Daniel P Raleigh
Journal:  J Am Chem Soc       Date:  2010-04-07       Impact factor: 15.419

4.  Unbiased cold denaturation: low- and high-temperature unfolding of yeast frataxin under physiological conditions.

Authors:  Annalisa Pastore; Stephen R Martin; Anastasia Politou; Kalyan C Kondapalli; Timothy Stemmler; Piero A Temussi
Journal:  J Am Chem Soc       Date:  2007-04-06       Impact factor: 15.419

5.  "Invisible" conformers of an antifungal disulfide protein revealed by constrained cold and heat unfolding, CEST-NMR experiments, and molecular dynamics calculations.

Authors:  Ádám Fizil; Zoltán Gáspári; Terézia Barna; Florentine Marx; Gyula Batta
Journal:  Chemistry       Date:  2015-02-12       Impact factor: 5.236

Review 6.  Cold denaturation as a tool to measure protein stability.

Authors:  Domenico Sanfelice; Piero Andrea Temussi
Journal:  Biophys Chem       Date:  2015-05-22       Impact factor: 2.352

7.  Connecting high-temperature and low-temperature protein stability and aggregation.

Authors:  Mónica Rosa; Christopher J Roberts; Miguel A Rodrigues
Journal:  PLoS One       Date:  2017-05-04       Impact factor: 3.240

8.  Hydration shell differentiates folded and disordered states of a Trp-cage miniprotein, allowing characterization of structural heterogeneity by wide-line NMR measurements.

Authors:  Nóra Taricska; Mónika Bokor; Dóra K Menyhárd; Kálmán Tompa; András Perczel
Journal:  Sci Rep       Date:  2019-02-27       Impact factor: 4.379

9.  Quantifying the thermodynamics of protein unfolding using 2D NMR spectroscopy.

Authors:  Rita Puglisi; Oliver Brylski; Caterina Alfano; Stephen R Martin; Annalisa Pastore; Piero A Temussi
Journal:  Commun Chem       Date:  2020-08-07

10.  An optimized strategy to measure protein stability highlights differences between cold and hot unfolded states.

Authors:  Caterina Alfano; Domenico Sanfelice; Stephen R Martin; Annalisa Pastore; Piero Andrea Temussi
Journal:  Nat Commun       Date:  2017-05-18       Impact factor: 14.919

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