Literature DB >> 16201869

Dynamic chromatin: concerted nucleosome remodelling and acetylation.

Anton Eberharter1, Roger Ferreira, Peter Becker.   

Abstract

The flexibility of chromatin that enables translation of environmental cues into changes in genome utilisation, relies on a battery of enzymes able to modulate chromatin structure in a highly targeted and regulated manner. The most dynamic structural changes are brought about by two kinds of enzymes with different functional principles. Changes in the acetylation status of histones modulate the folding of the nucleosomal fibre. The histone-DNA interactions that define the nucleosome itself can be disrupted by ATP-dependent remodelling factors. This review focuses on recent developments that illustrate various strategies for integrating these disparate activities into complex regulatory schemes. Synergies may be brought about by consecutive or parallel action during the stepwise process of chromatin opening or closing. Tight co-ordination may be achieved by direct interaction of (de-)acetylation enzymes and remodelling ATPases or even permanent residence within the same multi-enzyme complex. The fact that remodelling ATPases can be acetylated by histone acetyltransferases themselves suggests exciting possibilities for the co-ordinate modulation of chromatin structure and remodelling enzymes.

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Year:  2005        PMID: 16201869     DOI: 10.1515/BC.2005.087

Source DB:  PubMed          Journal:  Biol Chem        ISSN: 1431-6730            Impact factor:   3.915


  21 in total

1.  The INO80 ATP-dependent chromatin remodeling complex is a nucleosome spacing factor.

Authors:  Maheshi Udugama; Abdellah Sabri; Blaine Bartholomew
Journal:  Mol Cell Biol       Date:  2010-12-06       Impact factor: 4.272

Review 2.  ATP-dependent chromatin remodeling factors and DNA damage repair.

Authors:  Mary Ann Osley; Toyoko Tsukuda; Jac A Nickoloff
Journal:  Mutat Res       Date:  2007-01-21       Impact factor: 2.433

3.  Kinetic proofreading of gene activation by chromatin remodeling.

Authors:  R Blossey; H Schiessel
Journal:  HFSP J       Date:  2008-04-22

4.  The nonhistone, N-terminal tail of an essential, chimeric H2A variant regulates mitotic H3-S10 dephosphorylation.

Authors:  Xiaoyuan Song; Josephine Bowen; Wei Miao; Yifan Liu; Martin A Gorovsky
Journal:  Genes Dev       Date:  2012-03-15       Impact factor: 11.361

5.  The N-CoR complex enables chromatin remodeler SNF2H to enhance repression by thyroid hormone receptor.

Authors:  Theresa Alenghat; Jiujiu Yu; Mitchell A Lazar
Journal:  EMBO J       Date:  2006-08-17       Impact factor: 11.598

Review 6.  Constitutional Epi/Genetic Conditions: Genetic, Epigenetic, and Environmental Factors.

Authors:  Laila C Schenkel; David Rodenhiser; Victoria Siu; Elizabeth McCready; Peter Ainsworth; Bekim Sadikovic
Journal:  J Pediatr Genet       Date:  2016-11-08

7.  Chromatin structure determines accessibility of a hairpin polyamide-chlorambucil conjugate at histone H4 genes in pancreatic cancer cells.

Authors:  Christine Jespersen; Elisabetta Soragni; C James Chou; Paramjit S Arora; Peter B Dervan; Joel M Gottesfeld
Journal:  Bioorg Med Chem Lett       Date:  2012-04-25       Impact factor: 2.823

8.  Epigenetic control of the immune escape mechanisms in malignant carcinomas.

Authors:  A Francesca Setiadi; Muriel D David; Robyn P Seipp; Jennifer A Hartikainen; Rayshad Gopaul; Wilfred A Jefferies
Journal:  Mol Cell Biol       Date:  2007-09-17       Impact factor: 4.272

9.  Structural studies of human histone deacetylase 8 and its site-specific variants complexed with substrate and inhibitors.

Authors:  Daniel P Dowling; Stephanie L Gantt; Samuel G Gattis; Carol A Fierke; David W Christianson
Journal:  Biochemistry       Date:  2008-12-23       Impact factor: 3.162

Review 10.  Evolution of the arginase fold and functional diversity.

Authors:  D P Dowling; L Di Costanzo; H A Gennadios; D W Christianson
Journal:  Cell Mol Life Sci       Date:  2008-07       Impact factor: 9.261

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