Literature DB >> 16170213

A simple and efficient method for isolation of DNA in high mucilaginous plant tissues.

Ileana Echevarría-Machado1, Lucila A Sánchez-Cach, Cecilia Hernández-Zepeda, Renata Rivera-Madrid, Oscar A Moreno-Valenzuela.   

Abstract

A protocol is described for rapid DNA isolation from Malvaceae plant species and different tissues of Bixaceae that contain large amounts of polysaccharides, polyphenols, and pigments that interfere with DNA extractions. The method is a modification of Dellaporta et al. The current protocol is simple, and no phenol-chloroform extraction, ethanol, or isopropranol precipitation is required. The method is based in the incubation of soluble DNA with silica, mix in batch during the extraction. The procedure can be completed in 2 h and many samples can be processed at the same time. DNA of excellent quality was recovered and used for polymerase chain reaction (PCR) amplification, restriction enzyme digestion, and Southern blot analysis. The method was used with healthy Bixa orellana and virus-infected Malvaceae plants.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 16170213     DOI: 10.1385/MB:31:2:129

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  6 in total

1.  Extraction of DNA from milligram amounts of fresh, herbarium and mummified plant tissues.

Authors:  S O Rogers; A J Bendich
Journal:  Plant Mol Biol       Date:  1985-03       Impact factor: 4.076

2.  DNA forms indicate rolling circle and recombination-dependent replication of Abutilon mosaic virus.

Authors:  H Jeske; M Lütgemeier; W Preiss
Journal:  EMBO J       Date:  2001-11-01       Impact factor: 11.598

3.  DNA extraction technique for PCR in rain forest plant species.

Authors:  K D Scott; J Playford
Journal:  Biotechniques       Date:  1996-06       Impact factor: 1.993

4.  Identification of a novel circular single-stranded DNA associated with cotton leaf curl disease in Pakistan.

Authors:  S Mansoor; S H Khan; A Bashir; M Saeed; Y Zafar; K A Malik; R Briddon; J Stanley; P G Markham
Journal:  Virology       Date:  1999-06-20       Impact factor: 3.616

5.  Sinaloa Tomato Leaf Curl Geminivirus: Biological and Molecular Evidence for a New Subgroup III Virus.

Authors:  A M Idris; J K Brown
Journal:  Phytopathology       Date:  1998-07       Impact factor: 4.025

6.  A quick and inexpensive method for removing polysaccharides from plant genomic DNA.

Authors:  G Fang; S Hammar; R Grumet
Journal:  Biotechniques       Date:  1992-07       Impact factor: 1.993

  6 in total
  14 in total

1.  CKC: isolation of nucleic acids from a diversity of plants using CTAB and silica columns.

Authors:  David C Henderson; John Hammond
Journal:  Mol Biotechnol       Date:  2013-02       Impact factor: 2.695

2.  A rapid and efficient method for isolating high quality DNA from leaves of carnivorous plants from the Drosera genus.

Authors:  Flore Biteau; Estelle Nisse; Alain Hehn; Sissi Miguel; Paul Hannewald; Frédéric Bourgaud
Journal:  Mol Biotechnol       Date:  2012-07       Impact factor: 2.695

3.  Genetic and chemical diversity of high mucilaginous plants of Sida complex by ISSR markers and chemical fingerprinting.

Authors:  Sanjog T Thul; Ankit K Srivastava; Subhash C Singh; Karuna Shanker
Journal:  Mol Biotechnol       Date:  2011-09       Impact factor: 2.695

4.  Retroelements and DNA Methylation Could Contribute to Diversity of 5S rDNA in Agave L.

Authors:  Y J Tamayo-Ordóñez; J A Narváez-Zapata; M C Tamayo-Ordóñez; L F Sánchez-Teyer
Journal:  J Mol Evol       Date:  2018-07-10       Impact factor: 2.395

5.  Isolation and purification of RNA from tissues rich in polyphenols, polysaccharides, and pigments of annatto (Bixa orellana L.).

Authors:  Simone M Rodrigues; Virgínia L F Soares; Tahise M de Oliveira; Abelmon S Gesteira; Wagner C Otoni; Marcio G C Costa
Journal:  Mol Biotechnol       Date:  2007-08-08       Impact factor: 2.695

6.  Preliminary identification and coat protein gene phylogenetic relationships of begomoviruses associated with native flora and cultivated plants from the Yucatan Peninsula of Mexico.

Authors:  Cecilia Hernández-Zepeda; Ali M Idris; Germán Carnevali; Judith K Brown; Oscar A Moreno-Valenzuela
Journal:  Virus Genes       Date:  2007-08-08       Impact factor: 2.332

Review 7.  The biotechnology (genetic transformation and molecular biology) of Bixa orellana L. (achiote).

Authors:  Jaime A Teixeira da Silva; Judit Dobránszki; Renata Rivera-Madrid
Journal:  Planta       Date:  2018-05-10       Impact factor: 4.116

8.  Physiological differences and changes in global DNA methylation levels in Agave angustifolia Haw. albino variant somaclones during the micropropagation process.

Authors:  Fátima Duarte-Aké; Eduardo Castillo-Castro; Felipe Barredo Pool; Francisco Espadas; Jorge M Santamaría; Manuel L Robert; Clelia De-la-Peña
Journal:  Plant Cell Rep       Date:  2016-09-02       Impact factor: 4.570

9.  KNOX1 is expressed and epigenetically regulated during in vitro conditions in Agave spp.

Authors:  Clelia De-la-Peña; Geovanny Nic-Can; Gabriel Ojeda; José L Herrera-Herrera; Adolfo López-Torres; Kazimierz Wrobel; Manuel L Robert-Díaz
Journal:  BMC Plant Biol       Date:  2012-11-05       Impact factor: 4.215

10.  New insights into somatic embryogenesis: leafy cotyledon1, baby boom1 and WUSCHEL-related homeobox4 are epigenetically regulated in Coffea canephora.

Authors:  Geovanny I Nic-Can; Adolfo López-Torres; Felipe Barredo-Pool; Kazimierz Wrobel; Víctor M Loyola-Vargas; Rafael Rojas-Herrera; Clelia De-la-Peña
Journal:  PLoS One       Date:  2013-08-20       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.