Literature DB >> 21264688

Genetic and chemical diversity of high mucilaginous plants of Sida complex by ISSR markers and chemical fingerprinting.

Sanjog T Thul1, Ankit K Srivastava, Subhash C Singh, Karuna Shanker.   

Abstract

A method was developed based on multiple approaches wherein DNA and chemical analysis was carried out toward differentiation of important species of Sida complex that is being used for commercial preparation. Isolated DNA samples were successfully performed through PCR amplification using ISSR markers and degree of genetic diversity among the different species of Sida is compared with that of chemical diversity. For genetic fingerprint investigation, selected 10 ISSR primers generating reproducible banding patterns were used. Among the total of 63 amplicons, 62 were recorded as polymorphic, genetic similarity index deduced from ISSR profiles ranged from 12 to 51%. Based on similarity index, S. acuta and S. rhombifolia found to be most similar (51%). High number of species-specific bands played pivotal role to delineate species at genetic level. Investigation based on HPTLC fingerprints analysis revealed 23 bands representing to characteristic chemicals and similarity index ranged from 73 to 91%. Prominent distinguishable bands were observed only in S. acuta, while S. cordifolia and S. rhombifolia shared most bands making them difficult to identify on chemical fingerprint basis. This report summarizes the genotypic and chemotypic diversity and the use of profiles for authentication of species of Sida complex.

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Year:  2011        PMID: 21264688     DOI: 10.1007/s12033-011-9380-z

Source DB:  PubMed          Journal:  Mol Biotechnol        ISSN: 1073-6085            Impact factor:   2.695


  10 in total

1.  A simple and efficient method for isolation of DNA in high mucilaginous plant tissues.

Authors:  Ileana Echevarría-Machado; Lucila A Sánchez-Cach; Cecilia Hernández-Zepeda; Renata Rivera-Madrid; Oscar A Moreno-Valenzuela
Journal:  Mol Biotechnol       Date:  2005-10       Impact factor: 2.695

2.  Mathematical model for studying genetic variation in terms of restriction endonucleases.

Authors:  M Nei; W H Li
Journal:  Proc Natl Acad Sci U S A       Date:  1979-10       Impact factor: 11.205

3.  Studies on medicinal plants of Sri Lanka. III. Pharmacologically important alkaloids of some sida species.

Authors:  A A Gunatilaka; S Sotheeswaran; S Balasubramaniam; A I Chandrasekara; H T Sriyani
Journal:  Planta Med       Date:  1980-05       Impact factor: 3.352

4.  Alkaloid constituents of Sida acuta, S. humilis, S. rhombifolia and S. spinosa.

Authors:  A Prakash; R K Varma; S Ghosal
Journal:  Planta Med       Date:  1981-12       Impact factor: 3.352

5.  Antistress, Adoptogenic Activity of Sida cordifolia Roots in Mice.

Authors:  Meera Sumanth; S S Mustafa
Journal:  Indian J Pharm Sci       Date:  2009-05       Impact factor: 0.975

6.  Molecular profiling of "Chirayat" complex using Inter Simple Sequence Repeat (ISSR) markers.

Authors:  Shubhada Tamhankar; Vinaya Ghate; Ajit Raut; Bharati Rajput
Journal:  Planta Med       Date:  2009-04-06       Impact factor: 3.352

7.  Cytotoxicity and antibacterial activity of Sida rhombifolia (Malvaceae) grown in Bangladesh.

Authors:  M Ekramul Islam; M Ekramul Haque; M A Mosaddik
Journal:  Phytother Res       Date:  2003-09       Impact factor: 5.878

8.  A quick and inexpensive method for removing polysaccharides from plant genomic DNA.

Authors:  G Fang; S Hammar; R Grumet
Journal:  Biotechniques       Date:  1992-07       Impact factor: 1.993

9.  Antimalarial activity of Sida acuta Burm. f. (Malvaceae) and Pterocarpus erinaceus Poir. (Fabaceae).

Authors:  Damintoti Karou; Mamoudou H Dicko; Souleymane Sanon; Jacques Simpore; Alfred S Traore
Journal:  J Ethnopharmacol       Date:  2003-12       Impact factor: 4.360

10.  Anti-arthritic activity of various extracts of Sida rhombifolia aerial parts.

Authors:  S R Gupta; S A Nirmal; R Y Patil; G S Asane
Journal:  Nat Prod Res       Date:  2009       Impact factor: 2.861

  10 in total
  2 in total

1.  Genetic diversity of Centella asiatica in China analyzed by inter-simple sequence repeat (ISSR) markers: combination analysis with chemical diversity.

Authors:  Xiao-Gang Zhang; Ting Han; Zhi-Gao He; Qiao-Yan Zhang; Lei Zhang; Khalid Rahman; Lu-Ping Qin
Journal:  J Nat Med       Date:  2011-08-19       Impact factor: 2.343

Review 2.  Genomic profile of the plants with pharmaceutical value.

Authors:  Saikat Gantait; Sandip Debnath; Md Nasim Ali
Journal:  3 Biotech       Date:  2014-04-18       Impact factor: 2.406

  2 in total

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