Literature DB >> 16164420

Far-red fluorescent proteins evolved from a blue chromoprotein from Actinia equina.

Maria A Shkrob1, Yurii G Yanushevich, Dmitriy M Chudakov, Nadya G Gurskaya, Yulii A Labas, Sergey Y Poponov, Nikolay N Mudrik, Sergey Lukyanov, Konstantin A Lukyanov.   

Abstract

Proteins of the GFP (green fluorescent protein) family demonstrate a great spectral and phylogenetic diversity. However, there is still an intense demand for red-shifted GFP-like proteins in both basic and applied science. To obtain GFP-like chromoproteins with red-shifted absorption, we performed a broad search in blue-coloured Anthozoa species. We revealed specimens of Actinia equina (beadlet anemone) exhibiting a bright blue circle band at the edge of the basal disc. A novel blue chromoprotein, aeCP597, with an absorption maximum at 597 nm determining the coloration of the anemone basal disk was cloned. AeCP597 carries a chromophore chemically identical with that of the well-studied DsRed (red fluorescent protein from Discosoma sp.). Thus a strong 42-nm bathochromic shift of aeCP597 absorption compared with DsRed is determined by peculiarities of chromophore environment. Site-directed and random mutagenesis of aeCP597 resulted in far-red fluorescent mutants with emission maxima at up to 663 nm. The most bright and stable mutant AQ143 possessed excitation and emission maxima at 595 and 655 nm respectively. Thus aeCP597 and its fluorescent mutants set a new record of red-shifted absorption and emission maxima among GFP-like proteins.

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Year:  2005        PMID: 16164420      PMCID: PMC1316306          DOI: 10.1042/BJ20051314

Source DB:  PubMed          Journal:  Biochem J        ISSN: 0264-6021            Impact factor:   3.857


  27 in total

1.  Fluorescent proteins from nonbioluminescent Anthozoa species.

Authors:  M V Matz; A F Fradkov; Y A Labas; A P Savitsky; A G Zaraisky; M L Markelov; S A Lukyanov
Journal:  Nat Biotechnol       Date:  1999-10       Impact factor: 54.908

Review 2.  The molecular properties and applications of Anthozoa fluorescent proteins and chromoproteins.

Authors:  Vladislav V Verkhusha; Konstantin A Lukyanov
Journal:  Nat Biotechnol       Date:  2004-03       Impact factor: 54.908

3.  Amplification of cDNA ends based on template-switching effect and step-out PCR.

Authors:  M Matz; D Shagin; E Bogdanova; O Britanova; S Lukyanov; L Diatchenko; A Chenchik
Journal:  Nucleic Acids Res       Date:  1999-03-15       Impact factor: 16.971

4.  Evolution of new nonantibody proteins via iterative somatic hypermutation.

Authors:  Lei Wang; W Coyt Jackson; Paul A Steinbach; Roger Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-19       Impact factor: 11.205

5.  A purple-blue chromoprotein from Goniopora tenuidens belongs to the DsRed subfamily of GFP-like proteins.

Authors:  Vladimir I Martynov; Boris I Maksimov; Natalya Y Martynova; Alexey A Pakhomov; Nadya G Gurskaya; Sergey A Lukyanov
Journal:  J Biol Chem       Date:  2003-09-15       Impact factor: 5.157

6.  Structural basis for dual excitation and photoisomerization of the Aequorea victoria green fluorescent protein.

Authors:  K Brejc; T K Sixma; P A Kitts; S R Kain; R Y Tsien; M Ormö; S J Remington
Journal:  Proc Natl Acad Sci U S A       Date:  1997-03-18       Impact factor: 11.205

7.  Site-directed mutagenesis by overlap extension using the polymerase chain reaction.

Authors:  S N Ho; H D Hunt; R M Horton; J K Pullen; L R Pease
Journal:  Gene       Date:  1989-04-15       Impact factor: 3.688

8.  Wavelength mutations and posttranslational autoxidation of green fluorescent protein.

Authors:  R Heim; D C Prasher; R Y Tsien
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-20       Impact factor: 11.205

9.  Crystal structure of the Aequorea victoria green fluorescent protein.

Authors:  M Ormö; A B Cubitt; K Kallio; L A Gross; R Y Tsien; S J Remington
Journal:  Science       Date:  1996-09-06       Impact factor: 47.728

10.  Chemical nature of the light emitter of the Aequorea green fluorescent protein.

Authors:  H Niwa; S Inouye; T Hirano; T Matsuno; S Kojima; M Kubota; M Ohashi; F I Tsuji
Journal:  Proc Natl Acad Sci U S A       Date:  1996-11-26       Impact factor: 11.205

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  27 in total

1.  Generation of longer emission wavelength red fluorescent proteins using computationally designed libraries.

Authors:  Roberto A Chica; Matthew M Moore; Benjamin D Allen; Stephen L Mayo
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-08       Impact factor: 11.205

Review 2.  Noninvasive biophotonic imaging for studies of infectious disease.

Authors:  Nuria Andreu; Andrea Zelmer; Siouxsie Wiles
Journal:  FEMS Microbiol Rev       Date:  2010-10-19       Impact factor: 16.408

Review 3.  Fluorescent proteins and their use in marine biosciences, biotechnology, and proteomics.

Authors:  Gabor Mocz
Journal:  Mar Biotechnol (NY)       Date:  2007-03-19       Impact factor: 3.619

4.  A crystallographic study of bright far-red fluorescent protein mKate reveals pH-induced cis-trans isomerization of the chromophore.

Authors:  Sergei Pletnev; Dmitry Shcherbo; Dmitry M Chudakov; Nadezhda Pletneva; Ekaterina M Merzlyak; Alexander Wlodawer; Zbigniew Dauter; Vladimir Pletnev
Journal:  J Biol Chem       Date:  2008-08-04       Impact factor: 5.157

Review 5.  Fluorescent proteins as biomarkers and biosensors: throwing color lights on molecular and cellular processes.

Authors:  Olesya V Stepanenko; Vladislav V Verkhusha; Irina M Kuznetsova; Vladimir N Uversky; K K Turoverov
Journal:  Curr Protein Pept Sci       Date:  2008-08       Impact factor: 3.272

6.  In vitro characterization of genetically expressed absorbing proteins using photoacoustic spectroscopy.

Authors:  Jan Laufer; Amit Jathoul; Martin Pule; Paul Beard
Journal:  Biomed Opt Express       Date:  2013-10-14       Impact factor: 3.732

Review 7.  Genetically encodable fluorescent biosensors for tracking signaling dynamics in living cells.

Authors:  Robert H Newman; Matthew D Fosbrink; Jin Zhang
Journal:  Chem Rev       Date:  2011-04-01       Impact factor: 60.622

8.  Crystallographic study of red fluorescent protein eqFP578 and its far-red variant Katushka reveals opposite pH-induced isomerization of chromophore.

Authors:  Nadya V Pletneva; Vladimir Z Pletnev; Irina I Shemiakina; Dmitriy M Chudakov; Igor Artemyev; Alexander Wlodawer; Zbigniew Dauter; Sergei Pletnev
Journal:  Protein Sci       Date:  2011-06-10       Impact factor: 6.725

9.  Generation of transgenic mouse fluorescent reporter lines for studying hematopoietic development.

Authors:  Andrei M Vacaru; Joseph Vitale; Johnathan Nieves; Margaret H Baron
Journal:  Methods Mol Biol       Date:  2014

Review 10.  The fluorescent protein palette: tools for cellular imaging.

Authors:  Richard N Day; Michael W Davidson
Journal:  Chem Soc Rev       Date:  2009-08-04       Impact factor: 54.564

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