Literature DB >> 16158189

RNA uridylyltransferases.

R Aphasizhev1.   

Abstract

The terminal RNA uridylyltransferases (TUTases) catalyze transfer of UMP residues to the 3' hydroxyl group of RNA. These activities are widespread among eukaryotes and appear to be involved in a variety of RNA-processing pathways. Recent studies of RNA editing in trypanosomatids have provided the first insights into the biological functions of RNA uridylyltransferases, which had eluded biochemical identification despite 30-year-old evidence of such activities in mammals and plants. Comparative sequence analysis of trypanosomal TUTases and their homologs revealed by large-scale genomic projects demonstrates a significant level of biochemical and structural diversity between putative uridylyltransferases. The conserved catalytic domain has acquired additional protein modules and appears to have adapted to perform functionally distinct tasks of guided U-insertion into mRNA and constrained addition of an oligo[U] tail to guide RNAs. Here I discuss the current knowledge of this novel enzyme family and possible roles of RNA uridylylation in the regulation of gene expression.

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Substances:

Year:  2005        PMID: 16158189     DOI: 10.1007/s00018-005-5198-9

Source DB:  PubMed          Journal:  Cell Mol Life Sci        ISSN: 1420-682X            Impact factor:   9.261


  28 in total

1.  UTP-bound and Apo structures of a minimal RNA uridylyltransferase.

Authors:  Jason Stagno; Inna Aphasizheva; Anja Rosengarth; Hartmut Luecke; Ruslan Aphasizhev
Journal:  J Mol Biol       Date:  2006-12-02       Impact factor: 5.469

2.  Targeted depletion of a mitochondrial nucleotidyltransferase suggests the presence of multiple enzymes that polymerize mRNA 3' tails in Trypanosoma brucei mitochondria.

Authors:  Chia-Ying Kao; Laurie K Read
Journal:  Mol Biochem Parasitol       Date:  2007-04-27       Impact factor: 1.759

Review 3.  RNA-specific ribonucleotidyl transferases.

Authors:  Georges Martin; Walter Keller
Journal:  RNA       Date:  2007-09-13       Impact factor: 4.942

4.  Terminal RNA uridylyltransferases of trypanosomes.

Authors:  Ruslan Aphasizhev; Inna Aphasizheva
Journal:  Biochim Biophys Acta       Date:  2007-12-23

5.  Novel TUTase associates with an editosome-like complex in mitochondria of Trypanosoma brucei.

Authors:  Inna Aphasizheva; Gene-Errol Ringpis; James Weng; Paul D Gershon; Richard H Lathrop; Ruslan Aphasizhev
Journal:  RNA       Date:  2009-05-22       Impact factor: 4.942

6.  3' adenylation determines mRNA abundance and monitors completion of RNA editing in T. brucei mitochondria.

Authors:  Ronald D Etheridge; Inna Aphasizheva; Paul D Gershon; Ruslan Aphasizhev
Journal:  EMBO J       Date:  2008-05-08       Impact factor: 11.598

Review 7.  tRNA nucleotidyltransferases: ancient catalysts with an unusual mechanism of polymerization.

Authors:  Heike Betat; Christiane Rammelt; Mario Mörl
Journal:  Cell Mol Life Sci       Date:  2010-02-14       Impact factor: 9.261

Review 8.  Integration of plastids with their hosts: Lessons learned from dinoflagellates.

Authors:  Richard G Dorrell; Christopher J Howe
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-20       Impact factor: 11.205

9.  Identification and characterization of nuclear non-canonical poly(A) polymerases from Trypanosoma brucei.

Authors:  Ronald D Etheridge; Daniel M Clemens; Paul D Gershon; Ruslan Aphasizhev
Journal:  Mol Biochem Parasitol       Date:  2008-11-25       Impact factor: 1.759

10.  The zinc-fingers of KREPA3 are essential for the complete editing of mitochondrial mRNAs in Trypanosoma brucei.

Authors:  Xuemin Guo; Nancy Lewis Ernst; Jason Carnes; Kenneth D Stuart
Journal:  PLoS One       Date:  2010-01-27       Impact factor: 3.240

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