Literature DB >> 16151190

The "inverse relationship between evolutionary rate and age of mammalian genes" is an artifact of increased genetic distance with rate of evolution and time of divergence.

Eran Elhaik, Niv Sabath, Dan Graur.   

Abstract

It has recently been claimed that older genes tend to evolve more slowly than newer ones (Alba and Castresana 2005). By simulation of genes of equal age, we show that the inverse correlation between age and rate is an artifact caused by our inability to detect homology when evolutionary distances are large. Since evolutionary distance increases with time of divergence and rate of evolution, homologs of fast-evolving genes are frequently undetected in distantly related taxa and are, hence, misclassified as "new." This misclassification causes the mean genetic distance of 'new' genes to be overestimated and the mean genetic distance of "old" genes to be underestimated.

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Year:  2005        PMID: 16151190     DOI: 10.1093/molbev/msj006

Source DB:  PubMed          Journal:  Mol Biol Evol        ISSN: 0737-4038            Impact factor:   16.240


  40 in total

1.  Age-dependent gain of alternative splice forms and biased duplication explain the relation between splicing and duplication.

Authors:  Julien Roux; Marc Robinson-Rechavi
Journal:  Genome Res       Date:  2010-12-20       Impact factor: 9.043

2.  Young proteins experience more variable selection pressures than old proteins.

Authors:  Anchal Vishnoi; Sergey Kryazhimskiy; Georgii A Bazykin; Sridhar Hannenhalli; Joshua B Plotkin
Journal:  Genome Res       Date:  2010-10-04       Impact factor: 9.043

Review 3.  Horizontal Gene Transfer and the History of Life.

Authors:  Vincent Daubin; Gergely J Szöllősi
Journal:  Cold Spring Harb Perspect Biol       Date:  2016-04-01       Impact factor: 10.005

4.  Evaluating Phylostratigraphic Evidence for Widespread De Novo Gene Birth in Genome Evolution.

Authors:  Bryan A Moyers; Jianzhi Zhang
Journal:  Mol Biol Evol       Date:  2016-01-11       Impact factor: 16.240

5.  Accelerated evolutionary rate may be responsible for the emergence of lineage-specific genes in ascomycota.

Authors:  James J Cai; Patrick C Y Woo; Susanna K P Lau; David K Smith; Kwok-Yung Yuen
Journal:  J Mol Evol       Date:  2006-06-03       Impact factor: 2.395

Review 6.  The evolutionary origin of orphan genes.

Authors:  Diethard Tautz; Tomislav Domazet-Lošo
Journal:  Nat Rev Genet       Date:  2011-08-31       Impact factor: 53.242

7.  Phylostratigraphic bias creates spurious patterns of genome evolution.

Authors:  Bryan A Moyers; Jianzhi Zhang
Journal:  Mol Biol Evol       Date:  2014-10-13       Impact factor: 16.240

8.  Similarly strong purifying selection acts on human disease genes of all evolutionary ages.

Authors:  James J Cai; Elhanan Borenstein; Rong Chen; Dmitri A Petrov
Journal:  Genome Biol Evol       Date:  2009-05-27       Impact factor: 3.416

9.  Relaxed purifying selection and possibly high rate of adaptation in primate lineage-specific genes.

Authors:  James J Cai; Dmitri A Petrov
Journal:  Genome Biol Evol       Date:  2010-07-12       Impact factor: 3.416

10.  The universal distribution of evolutionary rates of genes and distinct characteristics of eukaryotic genes of different apparent ages.

Authors:  Yuri I Wolf; Pavel S Novichkov; Georgy P Karev; Eugene V Koonin; David J Lipman
Journal:  Proc Natl Acad Sci U S A       Date:  2009-04-07       Impact factor: 11.205

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