Literature DB >> 16143624

Marker-based quantitative genetics in the wild?: the heritability and genetic correlation of chemical defenses in eucalyptus.

R L Andrew1, R Peakall, I R Wallis, J T Wood, E J Knight, W J Foley.   

Abstract

Marker-based methods for estimating heritability and genetic correlation in the wild have attracted interest because traditional methods may be impractical or introduce bias via G x E effects, mating system variation, and sampling effects. However, they have not been widely used, especially in plants. A regression-based approach, which uses a continuous measure of genetic relatedness, promises to be particularly appropriate for use in plants with mixed-mating systems and overlapping generations. Using this method, we found significant narrow-sense heritability of foliar defense chemicals in a natural population of Eucalyptus melliodora. We also demonstrated a genetic basis for the phenotypic correlation underlying an ecological example of conditioned flavor aversion involving different biosynthetic pathways. Our results revealed that heritability estimates depend on the spatial scale of the analysis in a way that offers insight into the distribution of genetic and environmental variance. This study is the first to successfully use a marker-based method to measure quantitative genetic parameters in a tree. We suggest that this method will prove to be a useful tool in other studies and offer some recommendations for future applications of the method.

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Year:  2005        PMID: 16143624      PMCID: PMC1456121          DOI: 10.1534/genetics.105.042952

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  31 in total

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Authors:  P E Smouse; R Peakall
Journal:  Heredity (Edinb)       Date:  1999-05       Impact factor: 3.821

2.  Estimation of pairwise relatedness with molecular markers.

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3.  An economic method for the fluorescent labeling of PCR fragments.

Authors:  M Schuelke
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4.  Estimating variance components in natural populations using inferred relationships.

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Journal:  Heredity (Edinb)       Date:  2000-04       Impact factor: 3.821

5.  Density dependence and population differentiation of genetic architecture in Impatiens capensis in natural environments.

Authors:  K Donohue; E H Pyle; D Messiqua; M S Heschel; J Schmitt
Journal:  Evolution       Date:  2000-12       Impact factor: 3.694

6.  Estimating quantitative genetic parameters using sibships reconstructed from marker data.

Authors:  S C Thomas; W G Hill
Journal:  Genetics       Date:  2000-08       Impact factor: 4.562

7.  Heritability of phenolics in Quercus laevis inferred using molecular markers.

Authors:  R Klaper; K Ritland; T A Mousseau; M D Hunter
Journal:  J Hered       Date:  2001 Sep-Oct       Impact factor: 2.645

Review 8.  Marker-inferred relatedness as a tool for detecting heritability in nature.

Authors:  K Ritland
Journal:  Mol Ecol       Date:  2000-09       Impact factor: 6.185

9.  Heritability of fitness in a wild mammal population.

Authors:  L E Kruuk; T H Clutton-Brock; J Slate; J M Pemberton; S Brotherstone; F E Guinness
Journal:  Proc Natl Acad Sci U S A       Date:  2000-01-18       Impact factor: 11.205

10.  Dinucleotide microsatellites from Eucalyptus sieberi: inheritance, diversity, and improved scoring of single-base differences.

Authors:  J C Glaubitz; L C Emebiri; G F Moran
Journal:  Genome       Date:  2001-12       Impact factor: 2.166

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  16 in total

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Authors:  C García-Verdugo; M Méndez; N Velázquez-Rosas; L Balaguer
Journal:  Oecologia       Date:  2010-06-09       Impact factor: 3.225

2.  Pedigree-free animal models: the relatedness matrix reloaded.

Authors:  Francesca D Frentiu; Sonya M Clegg; John Chittock; Terry Burke; Mark W Blows; Ian P F Owens
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Review 3.  Quantitative genetics approaches to study evolutionary processes in ecotoxicology; a perspective from research on the evolution of resistance.

Authors:  Paul L Klerks; Lingtian Xie; Jeffrey S Levinton
Journal:  Ecotoxicology       Date:  2011-03-29       Impact factor: 2.823

4.  From Leaf Metabolome to In Vivo Testing: Identifying Antifeedant Compounds for Ecological Studies of Marsupial Diets.

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5.  Intraspecific Variation in Nutritional Composition Affects the Leaf Age Preferences of a Mammalian Herbivore.

Authors:  Karen J Marsh; Jessica Ward; Ian R Wallis; William J Foley
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6.  Risk of herbivore attack and heritability of ontogenetic trajectories in plant defense.

Authors:  Sofía Ochoa-López; Roberto Rebollo; Kasey E Barton; Juan Fornoni; Karina Boege
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7.  Oxidizable Phenolic Concentrations Do Not Affect Development and Survival of Paropsis Atomaria Larvae Eating Eucalyptus Foliage.

Authors:  Karen J Marsh; Wufeng Zhou; Hannah J Wigley; William J Foley
Journal:  J Chem Ecol       Date:  2017-04-03       Impact factor: 2.626

8.  Genetic-based interactions among tree neighbors: identification of the most influential neighbors, and estimation of correlations among direct and indirect genetic effects for leaf disease and growth in Eucalyptus globulus.

Authors:  J Costa E Silva; B M Potts; A R Gilmour; R J Kerr
Journal:  Heredity (Edinb)       Date:  2017-05-31       Impact factor: 3.821

9.  Stability of genetic-based defensive chemistry across life stages in a Eucalyptus species.

Authors:  Julianne M O'Reilly-Wapstra; Jonathan R Humphreys; Brad M Potts
Journal:  J Chem Ecol       Date:  2007-10       Impact factor: 2.626

10.  Heritable variation in the foliar secondary metabolite sideroxylonal in Eucalyptus confers cross-resistance to herbivores.

Authors:  Rose L Andrew; Ian R Wallis; Chris E Harwood; Michael Henson; William J Foley
Journal:  Oecologia       Date:  2007-06-26       Impact factor: 3.225

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