Literature DB >> 16116795

Mammalian RNAi: a practical guide.

Peter Sandy1, Andrea Ventura, Tyler Jacks.   

Abstract

Silencing of gene expression by RNA interference (RNAi) has become a powerful tool for the functional annotation of the Caenorhabditis elegans and Drosophila melanogaster genomes. Recent advances in the design and delivery of targeting molecules now permit efficient and highly specific gene silencing in mammalian systems as well. RNAi offers a simple, fast, and cost-effective alternative to existing gene targeting technologies both in cell-based and in vivo settings. Synthetic small interfering RNA (siRNA) and retroviral short hairpin RNA (shRNA) libraries targeting thousands of human and mouse genes are publicly available for high-throughput genetic screens, and knockdown animals can be rapidly generated by lentivirus-mediated transgenesis. RNAi also holds great promise as a novel therapeutic approach. This review provides insight into the current gene silencing techniques in mammalian systems.

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Year:  2005        PMID: 16116795     DOI: 10.2144/05392RV01

Source DB:  PubMed          Journal:  Biotechniques        ISSN: 0736-6205            Impact factor:   1.993


  35 in total

Review 1.  In vivo RNAi: today and tomorrow.

Authors:  Norbert Perrimon; Jian-Quan Ni; Lizabeth Perkins
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-06-09       Impact factor: 10.005

2.  Complementary roles for histone deacetylases 1, 2, and 3 in differentiation of pluripotent stem cells.

Authors:  Glen W Humphrey; Yong-Hong Wang; Tazuko Hirai; Raji Padmanabhan; David M Panchision; Laura F Newell; Ronald D G McKay; Bruce H Howard
Journal:  Differentiation       Date:  2007-11-15       Impact factor: 3.880

3.  A small molecule inhibitor of alpha4 integrin-dependent cell migration.

Authors:  Jongkook Lee; Jiyong Hong; Tae-Gyu Nam; Eric C Peters; Anthony P Orth; Bernhard H Geierstanger; Lawrence E Goldfinger; Mark H Ginsberg; Charles Y Cho; Peter G Schultz
Journal:  Bioorg Med Chem       Date:  2008-02-26       Impact factor: 3.641

Review 4.  Brothers in arms: DNA enzymes, short interfering RNA, and the emerging wave of small-molecule nucleic acid-based gene-silencing strategies.

Authors:  Ravinay Bhindi; Roger G Fahmy; Harry C Lowe; Colin N Chesterman; Crispin R Dass; Murray J Cairns; Edward G Saravolac; Lun-Quan Sun; Levon M Khachigian
Journal:  Am J Pathol       Date:  2007-08-23       Impact factor: 4.307

5.  Modified vectors for the two-step directional cloning of inverted repeats for RNA interference in Drosophila.

Authors:  Andreas Jenny; Marek Mlodzik
Journal:  Biotechniques       Date:  2008-03       Impact factor: 1.993

6.  Synthetic antisense oligodeoxynucleotides to transiently suppress different nucleus- and chloroplast-encoded proteins of higher plant chloroplasts.

Authors:  Emine Dinç; Szilvia Z Tóth; Gert Schansker; Ferhan Ayaydin; László Kovács; Dénes Dudits; Gyozo Garab; Sándor Bottka
Journal:  Plant Physiol       Date:  2011-10-06       Impact factor: 8.340

Review 7.  Genetically engineered mouse models in cancer research.

Authors:  Jessica C Walrath; Jessica J Hawes; Terry Van Dyke; Karlyne M Reilly
Journal:  Adv Cancer Res       Date:  2010       Impact factor: 6.242

8.  Nitric oxide regulates BDNF release from nodose ganglion neurons in a pattern-dependent and cGMP-independent manner.

Authors:  Hui-ya Hsieh; Carolyn L Robertson; Anke Vermehren-Schmaedick; Agnieszka Balkowiec
Journal:  J Neurosci Res       Date:  2010-05-01       Impact factor: 4.164

9.  Silencing the NR2B gene in rat ACC neurons by lentivirus-delivered shRNA alleviates pain-related aversion.

Authors:  Shou-Gang Guo; Xiu-Hua Lv; Shan-Hui Guan; Hui-Lu Li; Yong Qiao; Hao Feng; Lin Cong; Gong-Ming Wang
Journal:  Int J Clin Exp Med       Date:  2015-05-15

10.  A novel expression system for artificial miRNAs containing no endogenous miRNA precursor sequences.

Authors:  Atsushi Shibata; Akiko Iwaki; Yasuyuki Fukumaki
Journal:  J RNAi Gene Silencing       Date:  2007-05-27
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