Literature DB >> 16108695

A protein molecule in an aqueous mixed solvent: fluctuation theory outlook.

Ivan L Shulgin1, Eli Ruckenstein.   

Abstract

In the present paper a procedure to calculate the properties of proteins in aqueous mixed solvents, particularly the excesses of the constituents of the mixed solvent near the protein molecule and the preferential binding parameters, is suggested. Expressions for the Kirkwood-Buff integrals in ternary mixtures and for the preferential binding parameter were derived and used to calculate various properties of infinitely dilute proteins in aqueous mixed solvents. The derived expressions and experimental information regarding the partial molar volumes and the preferential binding parameters were used to calculate the excesses (deficits) of water and cosolvent (in comparison with the bulk concentrations of protein-free mixed solvent) in the vicinity of ribonuclease A, ribonuclease T1, and lysozyme molecules. The calculations showed that water was in excess in the vicinity of ribonuclease A for water/glycerol and water/trehalose mixtures, and the cosolvent urea was in excess in the vicinity of ribonuclease T1 and lysozyme. The derivative of the activity coefficient of the protein with respect to the mole fraction of water was also calculated. This derivative was negative for the water/glycerol and water/trehalose mixed solvents and positive for the water/urea mixture. The mixture of lysozyme in the water/urea solvent is of particular interest, because the lysozyme at pH 7.0 is in its native state up to 9.3M urea, while at pH 2.0 it is denaturated between 2.5 and 5M and higher concentrations of urea. Our results demonstrated a striking similarity in the hydration of lysozyme at both pHs. It is worthwhile to note that the excesses of urea were only weakly composition dependent on both cases.

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Year:  2005        PMID: 16108695     DOI: 10.1063/1.2011388

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  15 in total

1.  Kirkwood-Buff integrals for ideal solutions.

Authors:  Elizabeth A Ploetz; Nikolaos Bentenitis; Paul E Smith
Journal:  J Chem Phys       Date:  2010-04-28       Impact factor: 3.488

2.  Local Fluctuations in Solution: Theory and Applications.

Authors:  Elizabeth A Ploetz; Paul E Smith
Journal:  Adv Chem Phys       Date:  2013       Impact factor: 1.000

3.  A protein molecule in a mixed solvent: the preferential binding parameter via the Kirkwood-Buff theory.

Authors:  Ivan L Shulgin; Eli Ruckenstein
Journal:  Biophys J       Date:  2005-11-04       Impact factor: 4.033

4.  Chemical potential derivatives and preferential interaction parameters in biological systems from Kirkwood-Buff theory.

Authors:  Paul E Smith
Journal:  Biophys J       Date:  2006-05-05       Impact factor: 4.033

5.  An analysis of the molecular origin of osmolyte-dependent protein stability.

Authors:  Jörg Rösgen; B Montgomery Pettitt; David Wayne Bolen
Journal:  Protein Sci       Date:  2007-02-27       Impact factor: 6.725

Review 6.  Recent applications of Kirkwood-Buff theory to biological systems.

Authors:  Veronica Pierce; Myungshim Kang; Mahalaxmi Aburi; Samantha Weerasinghe; Paul E Smith
Journal:  Cell Biochem Biophys       Date:  2007-11-28       Impact factor: 2.194

7.  On the Kirkwood-Buff inversion procedure.

Authors:  Paul E Smith
Journal:  J Chem Phys       Date:  2008-09-28       Impact factor: 3.488

8.  Kirkwood-Buff theory of four and higher component mixtures.

Authors:  Myungshim Kang; Paul E Smith
Journal:  J Chem Phys       Date:  2008-06-28       Impact factor: 3.488

9.  SANS/SAXS study of the BSA solvation properties in aqueous urea solutions via a global fit approach.

Authors:  Raffaele Sinibaldi; Maria Grazia Ortore; Francesco Spinozzi; Sérgio de Souza Funari; José Teixeira; Paolo Mariani
Journal:  Eur Biophys J       Date:  2008-03-26       Impact factor: 1.733

10.  Theory and Simulation of Multicomponent Osmotic Systems.

Authors:  Sadish Karunaweera; Moon Bae Gee; Samantha Weerasinghe; Paul E Smith
Journal:  J Chem Theory Comput       Date:  2012-10-09       Impact factor: 6.006

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