Literature DB >> 16088353

Organization of the mitochondrial genome of mantis shrimp Pseudosquilla ciliata (Crustacea: Stomatopoda).

Lars Podsiadlowski1, Thomas Bartolomaeus.   

Abstract

We determined the nearly complete mitochondrial genome of Pseudosquilla ciliata (Crustacea, Stomatopoda), including all protein-coding genes and all but one of the transfer RNAs. There were no gene rearrangements relative to the pattern shared by crustaceans and hexapods. Phylogenetic analysis using concatenated amino acid sequences of the mitochondrial protein-coding genes confirmed a basal position of Stomatopoda among Eumalacostraca. Pancrustacean relationships based on mitogenomic data were analyzed and are discussed in relation to crustacean and hexapod monophyly and hexapod affinities to crustacean subtaxa.

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Year:  2005        PMID: 16088353     DOI: 10.1007/s10126-005-0017-8

Source DB:  PubMed          Journal:  Mar Biotechnol (NY)        ISSN: 1436-2228            Impact factor:   3.727


  25 in total

Review 1.  Animal mitochondrial genomes.

Authors:  J L Boore
Journal:  Nucleic Acids Res       Date:  1999-04-15       Impact factor: 16.971

2.  Automatic annotation of organellar genomes with DOGMA.

Authors:  Stacia K Wyman; Robert K Jansen; Jeffrey L Boore
Journal:  Bioinformatics       Date:  2004-06-04       Impact factor: 6.937

3.  Organization of the mitochondrial genome of Antarctic krill Euphausia superba (Crustacea: Malacostraca).

Authors:  Ryuji J Machida; Masaki U Miya; Mitsugu M Yamauchi; Mutsumi Nishida; Shuhei Nishida
Journal:  Mar Biotechnol (NY)       Date:  2004-05-13       Impact factor: 3.619

4.  Multiple sequence alignment with Clustal X.

Authors:  F Jeanmougin; J D Thompson; M Gouy; D G Higgins; T J Gibson
Journal:  Trends Biochem Sci       Date:  1998-10       Impact factor: 13.807

5.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

6.  Dramatic mitochondrial gene rearrangements in the hermit crab Pagurus longicarpus (Crustacea, anomura).

Authors:  M J Hickerson; C W Cunningham
Journal:  Mol Biol Evol       Date:  2000-04       Impact factor: 16.240

7.  tRNA punctuation model of RNA processing in human mitochondria.

Authors:  D Ojala; J Montoya; G Attardi
Journal:  Nature       Date:  1981-04-09       Impact factor: 49.962

8.  The complete sequence of the mitochondrial genome of Daphnia pulex (Cladocera: Crustacea).

Authors:  T J Crease
Journal:  Gene       Date:  1999-06-11       Impact factor: 3.688

9.  Complete mitochondrial DNA sequence of the Japanese spiny lobster, Panulirus japonicus (Crustacea: Decapoda).

Authors:  Mitsugu Yamauchi; Masaki Miya; Mutsumi Nishida
Journal:  Gene       Date:  2002-07-24       Impact factor: 3.688

10.  Complete mitochondrial DNA sequence of the Australian freshwater crayfish, Cherax destructor (Crustacea: Decapoda: Parastacidae): a novel gene order revealed.

Authors:  Adam D Miller; Thuy T T Nguyen; Christopher P Burridge; Christopher M Austin
Journal:  Gene       Date:  2004-04-28       Impact factor: 3.688

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  16 in total

1.  A male reproduction-related Kazal-type peptidase inhibitor gene in the prawn, Macrobrachium rosenbergii: molecular characterization and expression patterns.

Authors:  Jun-Xia Cao; Jie-Qiong Dai; Zhong-Min Dai; Guo-Li Yin; Wei-Jun Yang
Journal:  Mar Biotechnol (NY)       Date:  2006-09-15       Impact factor: 3.619

2.  A PL10 vasa-like gene in the kuruma shrimp, Marsupenaeus japonicus, expressed during development and in adult gonad.

Authors:  Melony J Sellars; Russell E Lyons; Peter M Grewe; Tony Vuocolo; Lisa Leeton; Greg J Coman; Bernard M Degnan; Nigel P Preston
Journal:  Mar Biotechnol (NY)       Date:  2007-03-20       Impact factor: 3.619

3.  Analysis of the secondary structure of ITS1 in Pectinidae: implications for phylogenetic reconstruction and structural evolution.

Authors:  Shi Wang; Zhenmin Bao; Ning Li; Lingling Zhang; Jingjie Hu
Journal:  Mar Biotechnol (NY)       Date:  2007-02-08       Impact factor: 3.619

4.  A new peltogastrid rhizocephalan parasitising a hermit crab from the Japanese coast: a second species of Dipterosaccus Van Kampen & Boschma, 1925 (Crustacea: Cirripedia).

Authors:  R Yoshida; M Hirose; E Hirose
Journal:  Syst Parasitol       Date:  2013-01-09       Impact factor: 1.431

5.  Phylogenetic relationships of South China Sea snappers (genus Lutjanus; family Lutjanidae) based on mitochondrial DNA sequences.

Authors:  Yusong Guo; Zhongduo Wang; Chuwu Liu; Li Liu; Yun Liu
Journal:  Mar Biotechnol (NY)       Date:  2007-10-02       Impact factor: 3.619

6.  The complete mitochondrial genome of the common sea slater, Ligia oceanica (Crustacea, Isopoda) bears a novel gene order and unusual control region features.

Authors:  Fabian Kilpert; Lars Podsiadlowski
Journal:  BMC Genomics       Date:  2006-09-20       Impact factor: 3.969

7.  The complete mitochondrial genome of the sea spider Nymphon gracile (Arthropoda: Pycnogonida).

Authors:  Lars Podsiadlowski; Anke Braband
Journal:  BMC Genomics       Date:  2006-11-06       Impact factor: 3.969

8.  A complex evolutionary history in a remote archipelago: phylogeography and morphometrics of the Hawaiian endemic Ligia isopods.

Authors:  Carlos A Santamaria; Mariana Mateos; Stefano Taiti; Thomas J DeWitt; Luis A Hurtado
Journal:  PLoS One       Date:  2013-12-30       Impact factor: 3.240

9.  Contrasting phylogeography of sandy vs. rocky supralittoral isopods in the megadiverse and geologically dynamic Gulf of California and adjacent areas.

Authors:  Luis A Hurtado; Eun Jung Lee; Mariana Mateos
Journal:  PLoS One       Date:  2013-07-02       Impact factor: 3.240

10.  Evolution and phylogeny of the mud shrimps (Crustacea: Decapoda) revealed from complete mitochondrial genomes.

Authors:  Feng-Jiau Lin; Yuan Liu; Zhongli Sha; Ling Ming Tsang; Ka Hou Chu; Tin-Yam Chan; Ruiyu Liu; Zhaoxia Cui
Journal:  BMC Genomics       Date:  2012-11-16       Impact factor: 3.969

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