Literature DB >> 12242015

Complete mitochondrial DNA sequence of the Japanese spiny lobster, Panulirus japonicus (Crustacea: Decapoda).

Mitsugu Yamauchi1, Masaki Miya, Mutsumi Nishida.   

Abstract

We determined the complete nucleotide sequence of the mitochondrial genome for a Japanese spiny lobster, Panulirus japonicus (Crustacea: Decapoda). The entire genome was amplified using long polymerase chain reaction, and the products were subsequently used as templates for direct sequencing using a primer-walking strategy. The genome (15,717 base pairs) contained the same 37 genes (two ribosomal RNA, 22 transfer RNA, and 13 protein-coding genes) plus the putative control region as found in other arthropods, with the gene order identical to that of typical arthropods. Preliminary phylogenetic analyses of selected arthropods using concatenated amino acid sequences of the 13 protein-coding genes strongly supported monophyly of Decapoda species and confidently rejected "Macroura", a conventional taxon that shares an elongated abdominal body.

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Year:  2002        PMID: 12242015     DOI: 10.1016/s0378-1119(02)00824-7

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  28 in total

1.  Organization of the mitochondrial genome of Antarctic krill Euphausia superba (Crustacea: Malacostraca).

Authors:  Ryuji J Machida; Masaki U Miya; Mitsugu M Yamauchi; Mutsumi Nishida; Shuhei Nishida
Journal:  Mar Biotechnol (NY)       Date:  2004-05-13       Impact factor: 3.619

2.  Structure and variable numbers of tandem repeats (VNTRs) of the mitochondrial control region in mitten crab Eriocheir (Crustacean: Brachyura).

Authors:  Daizhen Zhang; Ge Ding; Guangyue Wang; Boping Tang; Hongying Sun
Journal:  Mol Biol Rep       Date:  2010-12-14       Impact factor: 2.316

3.  PCR-based approach for sequencing mitochondrial genomes of decapod crustaceans, with a practical example from kuruma prawn (Marsupenaeus japonicus).

Authors:  Mitsugu M Yamauchi; Masaki U Miya; Ryuji J Machida; Mutsumi Nishida
Journal:  Mar Biotechnol (NY)       Date:  2004-05-13       Impact factor: 3.619

4.  Complete mitochondrial genome of the Chinese spiny lobster Panulirus stimpsoni (Crustacea: Decapoda): genome characterization and phylogenetic considerations.

Authors:  Yuan Liu; Zhaoxia Cui
Journal:  Mol Biol Rep       Date:  2010-03-30       Impact factor: 2.316

5.  The mitochondrial genomes of Euphausia pacifica and Thysanoessa raschii sequenced using 454 next-generation sequencing, with a phylogenetic analysis of their position in the Malacostracan family tree.

Authors:  Mattias L Johansson; Angela L Sremba; Leah R Feinberg; Michael A Banks; William T Peterson
Journal:  Mol Biol Rep       Date:  2012-06-26       Impact factor: 2.316

6.  The complete mitochondrial genome of the black mud crab, Scylla serrata (Crustacea: Brachyura: Portunidae) and its phylogenetic position among (pan)crustaceans.

Authors:  Amnuay Jondeung; Wirangrong Karinthanyakit; Jitlada Kaewkhumsan
Journal:  Mol Biol Rep       Date:  2012-10-11       Impact factor: 2.316

7.  Complete mitochondrial DNA sequences of the decapod crustaceans Pseudocarcinus gigas (Menippidae) and Macrobrachium rosenbergii (Palaemonidae).

Authors:  Adam D Miller; Nicholas P Murphy; Christopher P Burridge; Christopher M Austin
Journal:  Mar Biotechnol (NY)       Date:  2005 Jul-Aug       Impact factor: 3.619

8.  The hypervariable domain of the mitochondrial control region in Atlantic spiny lobsters and its potential as a marker for investigating phylogeographic structuring.

Authors:  Fabio M Diniz; Norman Maclean; Masayoshi Ogawa; Israel H A Cintra; Paul Bentzen
Journal:  Mar Biotechnol (NY)       Date:  2005-06-04       Impact factor: 3.619

9.  Extensive gene order rearrangement in the mitochondrial genome of the centipede Scutigera coleoptrata.

Authors:  Enrico Negrisolo; Alessandro Minelli; Giorgio Valle
Journal:  J Mol Evol       Date:  2004-04       Impact factor: 2.395

10.  The mitochondrial genome of Euphausia superba (Prydz Bay) (Crustacea: Malacostraca: Euphausiacea) reveals a novel gene arrangement and potential molecular markers.

Authors:  Xin Shen; Haiqing Wang; Jianfeng Ren; Mei Tian; Minxiao Wang
Journal:  Mol Biol Rep       Date:  2009-07-04       Impact factor: 2.316

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