Literature DB >> 15180927

Automatic annotation of organellar genomes with DOGMA.

Stacia K Wyman1, Robert K Jansen, Jeffrey L Boore.   

Abstract

The Dual Organellar GenoMe Annotator (DOGMA) automates the annotation of organellar (plant chloroplast and animal mitochondrial) genomes. It is a Web-based package that allows the use of BLAST searches against a custom database, and conservation of basepairing in the secondary structure of animal mitochondrial tRNAs to identify and annotate genes. DOGMA provides a graphical user interface for viewing and editing annotations. Annotations are stored on our password-protected server to enable repeated sessions of working on the same genome. Finished annotations can be extracted for direct submission to GenBank.

Mesh：

Year:  2004        PMID： 15180927     DOI： 10.1093/bioinformatics/bth352

Source DB:  PubMed          Journal:  Bioinformatics        ISSN： 1367-4803            Impact factor:   6.937


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