Literature DB >> 16034531

X-Ray Structure of Rhodobacter Capsulatus Cytochrome bc (1): Comparison with its Mitochondrial and Chloroplast Counterparts.

Edward A Berry1, Li-Shar Huang, Lai K Saechao, Ning G Pon, Maria Valkova-Valchanova, Fevzi Daldal.   

Abstract

Ubihydroquinone: cytochrome (cyt)c oxidoreductase, or cyt bc (1), is a widespread, membrane integral enzyme that plays a crucial role during photosynthesis and respiration. It is one of the major contributors of the electrochemical proton gradient, which is subsequently used for ATP synthesis. The simplest form of the cyt bc (1) is found in bacteria, and it contains only the three ubiquitously conserved catalytic subunits: the Fe-S protein, cyt b and cyt c (1). Here we present a preliminary X-ray structure of Rhodobacter capsulatus cyt bc (1) at 3.8 A and compare it to the available structures of its homologues from mitochondria and chloroplast. Using the bacterial enzyme structure, we highlight the structural similarities and differences that are found among the three catalytic subunits between the members of this family of enzymes. In addition, we discuss the locations of currently known critical mutations, and their implications in terms of the cyt bc (1) catalysis.

Entities:  

Year:  2004        PMID: 16034531     DOI: 10.1023/B:PRES.0000036888.18223.0e

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  59 in total

Review 1.  NPS@: network protein sequence analysis.

Authors:  C Combet; C Blanchet; C Geourjon; G Deléage
Journal:  Trends Biochem Sci       Date:  2000-03       Impact factor: 13.807

2.  Uncovering the [2Fe2S] domain movement in cytochrome bc1 and its implications for energy conversion.

Authors:  E Darrouzet; M Valkova-Valchanova; C C Moser; P L Dutton; F Daldal
Journal:  Proc Natl Acad Sci U S A       Date:  2000-04-25       Impact factor: 11.205

3.  Structure of the cytochrome b6f complex of oxygenic photosynthesis: tuning the cavity.

Authors:  Genji Kurisu; Huamin Zhang; Janet L Smith; William A Cramer
Journal:  Science       Date:  2003-10-02       Impact factor: 47.728

4.  Assignment of the histidine axial ligands to the cytochrome bH and cytochrome bL components of the bc1 complex from Rhodobacter sphaeroides by site-directed mutagenesis.

Authors:  C H Yun; A R Crofts; R B Gennis
Journal:  Biochemistry       Date:  1991-07-09       Impact factor: 3.162

5.  A reductant-induced oxidation mechanism for complex I.

Authors:  P L Dutton; C C Moser; V D Sled; F Daldal; T Ohnishi
Journal:  Biochim Biophys Acta       Date:  1998-05-06

6.  Characterization of cytochrome b from Toxoplasma gondii and Q(o) domain mutations as a mechanism of atovaquone-resistance.

Authors:  D C McFadden; S Tomavo; E A Berry; J C Boothroyd
Journal:  Mol Biochem Parasitol       Date:  2000-04-30       Impact factor: 1.759

7.  A Q-cycle mechanism for the cyclic electron-transfer chain of Rhodopseudomonas sphaeroides.

Authors:  A R Crofts; S W Meinhardt
Journal:  Biochem Soc Trans       Date:  1982-08       Impact factor: 5.407

8.  The raised midpoint potential of the [2Fe2S] cluster of cytochrome bc1 is mediated by both the Qo site occupants and the head domain position of the Fe-S protein subunit.

Authors:  Jason W Cooley; Arthur G Roberts; Michael K Bowman; David M Kramer; Fevzi Daldal
Journal:  Biochemistry       Date:  2004-03-02       Impact factor: 3.162

9.  Roles of the soluble cytochrome c2 and membrane-associated cytochrome cy of Rhodobacter capsulatus in photosynthetic electron transfer.

Authors:  F E Jenney; R C Prince; F Daldal
Journal:  Biochemistry       Date:  1994-03-08       Impact factor: 3.162

10.  Multiple Q-cycle bypass reactions at the Qo site of the cytochrome bc1 complex.

Authors:  Florian Muller; Antony R Crofts; David M Kramer
Journal:  Biochemistry       Date:  2002-06-25       Impact factor: 3.162

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  82 in total

1.  Tyrosine triad at the interface between the Rieske iron-sulfur protein, cytochrome c1 and cytochrome c2 in the bc1 complex of Rhodobacter capsulatus.

Authors:  John A Kyndt; John C Fitch; Robert E Berry; Matt C Stewart; Kevin Whitley; Terry E Meyer; F Ann Walker; Michael A Cusanovich
Journal:  Biochim Biophys Acta       Date:  2012-01-28

2.  Intermonomer electron transfer between the b hemes of heterodimeric cytochrome bc(1).

Authors:  Pascal Lanciano; Bahia Khalfaoui-Hassani; Nur Selamoglu; Fevzi Daldal
Journal:  Biochemistry       Date:  2013-10-01       Impact factor: 3.162

3.  A robust genetic system for producing heterodimeric native and mutant cytochrome bc(1).

Authors:  Bahia Khalfaoui-Hassani; Pascal Lanciano; Fevzi Daldal
Journal:  Biochemistry       Date:  2013-10-01       Impact factor: 3.162

4.  Ilicicolin Inhibition and Binding at Center N of the Dimeric Cytochrome bc1 Complex Reveal Electron Transfer and Regulatory Interactions between Monomers.

Authors:  Raul Covian; Bernard L Trumpower
Journal:  J Biol Chem       Date:  2009-01-27       Impact factor: 5.157

Review 5.  The heme environment of mouse neuroglobin: histidine imidazole plane orientations obtained from solution NMR and EPR spectroscopy as compared with X-ray crystallography.

Authors:  F Ann Walker
Journal:  J Biol Inorg Chem       Date:  2006-04-04       Impact factor: 3.358

6.  X-Ray absorption studies of Zn2+ binding sites in bacterial, avian, and bovine cytochrome bc1 complexes.

Authors:  Lisa Giachini; Francesco Francia; Giulia Veronesi; Dong-Woo Lee; Fevzi Daldal; Li-Shar Huang; Edward A Berry; Tiziana Cocco; Sergio Papa; Federico Boscherini; Giovanni Venturoli
Journal:  Biophys J       Date:  2007-06-15       Impact factor: 4.033

7.  Hydrogen Bonding to the Substrate Is Not Required for Rieske Iron-Sulfur Protein Docking to the Quinol Oxidation Site of Complex III.

Authors:  Lothar Esser; Fei Zhou; Yihui Zhou; Yumei Xiao; Wai-Kwan Tang; Chang-An Yu; Zhaohai Qin; Di Xia
Journal:  J Biol Chem       Date:  2016-10-07       Impact factor: 5.157

8.  Mechanism of the Primary Charge Transfer Reaction in the Cytochrome bc1 Complex.

Authors:  Angela M Barragan; Klaus Schulten; Ilia A Solov'yov
Journal:  J Phys Chem B       Date:  2016-10-12       Impact factor: 2.991

9.  The road to the crystal structure of the cytochrome bc1 complex from the anoxigenic, photosynthetic bacterium Rhodobacter sphaeroides.

Authors:  Di Xia; Lothar Esser; Maria Elberry; Fei Zhou; Linda Yu; Chang-An Yu
Journal:  J Bioenerg Biomembr       Date:  2008-10-25       Impact factor: 2.945

10.  The dimeric structure of the cytochrome bc(1) complex prevents center P inhibition by reverse reactions at center N.

Authors:  Raul Covian; Bernard L Trumpower
Journal:  Biochim Biophys Acta       Date:  2008-04-11
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