Literature DB >> 15981010

Linkage map construction in allotetraploid creeping bentgrass (Agrostis stolonifera L.).

N Chakraborty1, J Bae, S Warnke, T Chang, G Jung.   

Abstract

Creeping bentgrass (Agrostis stolonifera L.) is one of the most adapted bentgrass species for use on golf course fairways and putting greens because of its high tolerance to low mowing height. It is a highly outcrossing allotetraploid species (2n=4x=28, A(2) and A(3) subgenomes). The first linkage map in this species is reported herein, and it was constructed based on a population derived from a cross between two heterozygous clones using 169 RAPD, 180 AFLP, and 39 heterologous cereal and 36 homologous bentgrass cDNA RFLP markers. The linkage map consists of 424 mapped loci covering 1,110 cM in 14 linkage groups, of which seven pairs of homoeologous chromosomes were identified based on duplicated loci. The numbering of all seven linkage groups in the bentgrass map was assigned according to common markers mapped on syntenous chromosomes of ryegrass and wheat. The number of markers linked in coupling and repulsion phase was in a 1:1 ratio, indicating disomic inheritance. This supports a strict allotetraploid inheritance in creeping bentgrass, as suggested by previous work based on chromosomal pairing and isozymes. This linkage map will assist in the tagging and eventually in marker-assisted breeding of economically important quantitative traits like disease resistance to dollar spot (Sclerotinia homoeocarpa F.T. Bennett) and brown patch (Rhizoctonia solani Kuhn).

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Year:  2005        PMID: 15981010     DOI: 10.1007/s00122-005-2065-x

Source DB:  PubMed          Journal:  Theor Appl Genet        ISSN: 0040-5752            Impact factor:   5.699


  22 in total

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Authors:  V Alm; C Fang; C S Busso; K M Devos; K Vollan; Z Grieg; O A Rognli
Journal:  Theor Appl Genet       Date:  2003-08-16       Impact factor: 5.699

2.  Stomatal size in fossil plants: evidence for polyploidy in majority of angiosperms.

Authors:  J Masterson
Journal:  Science       Date:  1994-04-15       Impact factor: 47.728

3.  A linkage map of diploid Avena based on RFLP loci and a locus conferring resistance to nine isolates of Puccinia coronata var. 'avenae'.

Authors:  P J Rayapati; J W Gregory; M Lee; R P Wise
Journal:  Theor Appl Genet       Date:  1994-12       Impact factor: 5.699

4.  AFLP: a new technique for DNA fingerprinting.

Authors:  P Vos; R Hogers; M Bleeker; M Reijans; T van de Lee; M Hornes; A Frijters; J Pot; J Peleman; M Kuiper
Journal:  Nucleic Acids Res       Date:  1995-11-11       Impact factor: 16.971

5.  Plant comparative genetics after 10 years.

Authors:  M D Gale; K M Devos
Journal:  Science       Date:  1998-10-23       Impact factor: 47.728

6.  Comparative mapping in grasses. Wheat relationships.

Authors:  A E Van Deynze; J C Nelson; E S Yglesias; S E Harrington; D P Braga; S R McCouch; M E Sorrells
Journal:  Mol Gen Genet       Date:  1995-10-25

7.  Genetic linkage mapping of an annual x perennial ryegrass population.

Authors:  S E Warnke; R E Barker; Geunhwa Jung; Sung-Chur Sim; M A Rouf Mian; M C Saha; L A Brilman; M P Dupal; J W Forster
Journal:  Theor Appl Genet       Date:  2004-04-07       Impact factor: 5.699

8.  Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.

Authors:  Shoshi Kikuchi; Kouji Satoh; Toshifumi Nagata; Nobuyuki Kawagashira; Koji Doi; Naoki Kishimoto; Junshi Yazaki; Masahiro Ishikawa; Hitomi Yamada; Hisako Ooka; Isamu Hotta; Keiichi Kojima; Takahiro Namiki; Eisuke Ohneda; Wataru Yahagi; Kohji Suzuki; Chao Jie Li; Kenji Ohtsuki; Toru Shishiki; Yasuhiro Otomo; Kazuo Murakami; Yoshiharu Iida; Sumio Sugano; Tatsuto Fujimura; Yutaka Suzuki; Yuki Tsunoda; Takashi Kurosaki; Takeko Kodama; Hiromi Masuda; Michie Kobayashi; Quihong Xie; Min Lu; Ryuya Narikawa; Akio Sugiyama; Kouichi Mizuno; Satoko Yokomizo; Junko Niikura; Rieko Ikeda; Junya Ishibiki; Midori Kawamata; Akemi Yoshimura; Junichirou Miura; Takahiro Kusumegi; Mitsuru Oka; Risa Ryu; Mariko Ueda; Kenichi Matsubara; Jun Kawai; Piero Carninci; Jun Adachi; Katsunori Aizawa; Takahiro Arakawa; Shiro Fukuda; Ayako Hara; Wataru Hashizume; Norihito Hayatsu; Koichi Imotani; Yoshiyuki Ishii; Masayoshi Itoh; Ikuko Kagawa; Shinji Kondo; Hideaki Konno; Ai Miyazaki; Naoki Osato; Yoshimi Ota; Rintaro Saito; Daisuke Sasaki; Kenjiro Sato; Kazuhiro Shibata; Akira Shinagawa; Toshiyuki Shiraki; Masayasu Yoshino; Yoshihide Hayashizaki; Ayako Yasunishi
Journal:  Science       Date:  2003-07-18       Impact factor: 47.728

9.  Molecular-genetic maps for group 1 chromosomes of Triticeae species and their relation to chromosomes in rice and oat.

Authors:  A E Deynze; J C Nelson; M E Sorrells; S R McCouch; J Dubcovsky; J Dvorák; K S Gill; B S Gill; E S Lagudah; R Appels
Journal:  Genome       Date:  1995-02       Impact factor: 2.166

10.  Synteny between a major heading-date QTL in perennial ryegrass (Lolium perenne L.) and the Hd3 heading-date locus in rice.

Authors:  I P Armstead; L B Turner; M Farrell; L Skøt; P Gomez; T Montoya; I S Donnison; I P King; M O Humphreys
Journal:  Theor Appl Genet       Date:  2003-11-21       Impact factor: 5.699

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  5 in total

1.  Mapping QTL for dollar spot resistance in creeping bentgrass (Agrostis stolonifera L.).

Authors:  N Chakraborty; J Curley; S Warnke; M D Casler; G Jung
Journal:  Theor Appl Genet       Date:  2006-09-13       Impact factor: 5.699

2.  Analysis of EST sequences suggests recent origin of allotetraploid colonial and creeping bentgrasses.

Authors:  David Rotter; Arvind K Bharti; Huaijun Michael Li; Chongyuan Luo; Stacy A Bonos; Suleiman Bughrara; Geunhwa Jung; Joachim Messing; William A Meyer; Stephen Rudd; Scott E Warnke; Faith C Belanger
Journal:  Mol Genet Genomics       Date:  2007-05-12       Impact factor: 2.980

3.  Transcriptome analysis of creeping bentgrass exposed to drought stress and polyamine treatment.

Authors:  Yingmei Ma; Vijaya Shukla; Emily B Merewitz
Journal:  PLoS One       Date:  2017-04-26       Impact factor: 3.240

4.  Comparative genome analysis between Agrostis stolonifera and members of the Pooideae subfamily, including Brachypodium distachyon.

Authors:  Loreto Araneda; Sung-Chur Sim; Jin-Joo Bae; Nanda Chakraborty; Joe Curley; Taehyun Chang; Maiko Inoue; Scott Warnke; Geunhwa Jung
Journal:  PLoS One       Date:  2013-11-11       Impact factor: 3.240

5.  Regulation of Heat Shock Factor Pathways by γ-aminobutyric Acid (GABA) Associated with Thermotolerance of Creeping Bentgrass.

Authors:  Ting Liu; Zhaoqiao Liu; Zhou Li; Yan Peng; Xinquan Zhang; Xiao Ma; Linkai Huang; Wei Liu; Gang Nie; Liwen He
Journal:  Int J Mol Sci       Date:  2019-09-23       Impact factor: 5.923

  5 in total

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