Literature DB >> 15961032

Expanding the alkane oxygenase toolbox: new enzymes and applications.

Jan B van Beilen1, Enrico G Funhoff.   

Abstract

As highly reduced hydrocarbons are abundant in the environment, enzymes that catalyze the terminal or subterminal oxygenation of alkanes are relatively easy to find. A number of these enzymes have been biochemically characterized in detail, because the potential of alkane hydroxylases to catalyze high added-value reactions is widely recognized. Nevertheless, the industrial application of these enzymes is restricted owing to the complex biochemistry, challenging process requirements, and the limited number of cloned and expressed enzymes. Rational and evolutionary engineering approaches have started to yield more robust and versatile enzyme systems, broadening the alkane oxygenase portfolio. In addition, metagenomic approaches provide access to many novel alkane oxygenase sequences.

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Year:  2005        PMID: 15961032     DOI: 10.1016/j.copbio.2005.04.005

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  29 in total

1.  Diversity and abundance of oil-degrading bacteria and alkane hydroxylase (alkB) genes in the subtropical seawater of Xiamen Island.

Authors:  Wanpeng Wang; Liping Wang; Zongze Shao
Journal:  Microb Ecol       Date:  2010-08-04       Impact factor: 4.552

2.  Intermediates in dioxygen activation by methane monooxygenase: a QM/MM study.

Authors:  David Rinaldo; Dean M Philipp; Stephen J Lippard; Richard A Friesner
Journal:  J Am Chem Soc       Date:  2007-02-28       Impact factor: 15.419

3.  Cage escape competes with geminate recombination during alkane hydroxylation by the diiron oxygenase AlkB.

Authors:  Rachel N Austin; Kate Luddy; Karla Erickson; Marilla Pender-Cudlip; Erin Bertrand; Dayi Deng; Ryan S Buzdygon; Jan B van Beilen; John T Groves
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

4.  CYP153A6, a soluble P450 oxygenase catalyzing terminal-alkane hydroxylation.

Authors:  Enrico G Funhoff; Ulrich Bauer; Inés García-Rubio; Bernard Witholt; Jan B van Beilen
Journal:  J Bacteriol       Date:  2006-07       Impact factor: 3.490

5.  Complete genome sequence of Pusillimonas sp. T7-7, a cold-tolerant diesel oil-degrading bacterium isolated from the Bohai Sea in China.

Authors:  Boyang Cao; Ting Ma; Yan Ren; Yi Ren; Guoqiang Li; Ping Li; Xi Guo; Peng Ding; Lu Feng
Journal:  J Bacteriol       Date:  2011-05-27       Impact factor: 3.490

6.  Degradation of crude oil by mixed cultures of bacteria isolated from the Qinghai-Tibet plateau and comparative analysis of metabolic mechanisms.

Authors:  Ruiqi Yang; Gaosen Zhang; Shiweng Li; Faegheh Moazeni; Yunshi Li; Yongna Wu; Wei Zhang; Tuo Chen; Guangxiu Liu; Binglin Zhang; Xiukun Wu
Journal:  Environ Sci Pollut Res Int       Date:  2018-11-20       Impact factor: 4.223

7.  Isolation and characterization of different bacterial strains for bioremediation of n-alkanes and polycyclic aromatic hydrocarbons.

Authors:  A Guermouche M'rassi; F Bensalah; J Gury; R Duran
Journal:  Environ Sci Pollut Res Int       Date:  2015-03-28       Impact factor: 4.223

8.  Genome and proteome of long-chain alkane degrading Geobacillus thermodenitrificans NG80-2 isolated from a deep-subsurface oil reservoir.

Authors:  Lu Feng; Wei Wang; Jiansong Cheng; Yi Ren; Guang Zhao; Chunxu Gao; Yun Tang; Xueqian Liu; Weiqing Han; Xia Peng; Rulin Liu; Lei Wang
Journal:  Proc Natl Acad Sci U S A       Date:  2007-03-19       Impact factor: 11.205

9.  Genome sequence of n-alkane-degrading Hydrocarboniphaga effusa strain AP103T (ATCC BAA-332T).

Authors:  Hung-Kuang Chang; Gerben J Zylstra; Jong-Chan Chae
Journal:  J Bacteriol       Date:  2012-09       Impact factor: 3.490

10.  Identification of amino acid residues involved in 4-chloroindole 3-hydroxylation by cytochrome P450 2A6 using screening of random libraries.

Authors:  Zhi-Gang Zhang; Yan Liu; F Peter Guengerich; Johannes H Matse; Jun Chen; Zhong-Liu Wu
Journal:  J Biotechnol       Date:  2008-10-15       Impact factor: 3.307

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