Literature DB >> 18984015

Identification of amino acid residues involved in 4-chloroindole 3-hydroxylation by cytochrome P450 2A6 using screening of random libraries.

Zhi-Gang Zhang1, Yan Liu, F Peter Guengerich, Johannes H Matse, Jun Chen, Zhong-Liu Wu.   

Abstract

Cytochrome P450 (P450) 2A6 is able to catalyze indole hydroxylation to form the blue dye indigo. The wild-type P450 2A6 enzyme was randomly mutated throughout the whole open reading frame and screened using 4-chloroindole hydroxylation, a substituted indole selected from 30 indole compounds for enhanced color development. Mutants with up to 5-fold increases of catalytic efficiency (k(cat)/K(m)) and 2-fold increases in k(cat) were selected after two rounds of screening. Important residues located both in (e.g., Thr305) and outside the active site (e.g., Ser224) were identified. The study utilized a better substrate for "indigo assay" to obtain new information on the structure-functional relationship of P450 2A6 that was not revealed by previous mutagenesis studies with this enzyme.

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Year:  2008        PMID: 18984015      PMCID: PMC4755720          DOI: 10.1016/j.jbiotec.2008.09.010

Source DB:  PubMed          Journal:  J Biotechnol        ISSN: 0168-1656            Impact factor:   3.307


  30 in total

Review 1.  Exploiting the versatility of human cytochrome P450 enzymes: the promise of blue roses from biotechnology.

Authors:  E M Gillam; F P Guengerich
Journal:  IUBMB Life       Date:  2001-12       Impact factor: 3.885

2.  THE CARBON MONOXIDE-BINDING PIGMENT OF LIVER MICROSOMES. I. EVIDENCE FOR ITS HEMOPROTEIN NATURE.

Authors:  T OMURA; R SATO
Journal:  J Biol Chem       Date:  1964-07       Impact factor: 5.157

3.  Substrate recognition sites in cytochrome P450 family 2 (CYP2) proteins inferred from comparative analyses of amino acid and coding nucleotide sequences.

Authors:  O Gotoh
Journal:  J Biol Chem       Date:  1992-01-05       Impact factor: 5.157

4.  Nomenclature Committee of the International Union of Biochemistry (NC-IUB). Nomenclature of electron-transfer proteins. Recommendations 1989.

Authors: 
Journal:  J Biol Chem       Date:  1992-01-05       Impact factor: 5.157

5.  Biosynthesis of new indigoid inhibitors of protein kinases using recombinant cytochrome P450 2A6.

Authors:  Zhongliu-Liu Wu; Pramod Aryal; Olivier Lozach; Laurent Meijer; F Peter Guengerich
Journal:  Chem Biodivers       Date:  2005-01       Impact factor: 2.408

6.  Oxidation of indole by cytochrome P450 enzymes.

Authors:  E M Gillam; L M Notley; H Cai; J J De Voss; F P Guengerich
Journal:  Biochemistry       Date:  2000-11-14       Impact factor: 3.162

7.  Molecular evolution by staggered extension process (StEP) in vitro recombination.

Authors:  H Zhao; L Giver; Z Shao; J A Affholter; F H Arnold
Journal:  Nat Biotechnol       Date:  1998-03       Impact factor: 54.908

Review 8.  Cytochrome P450 enzymes in the generation of commercial products.

Authors:  F Peter Guengerich
Journal:  Nat Rev Drug Discov       Date:  2002-05       Impact factor: 84.694

9.  Structural basis for the synthesis of indirubins as potent and selective inhibitors of glycogen synthase kinase-3 and cyclin-dependent kinases.

Authors:  Panagiotis Polychronopoulos; Prokopios Magiatis; Alexios-Leandros Skaltsounis; Vassilios Myrianthopoulos; Emmanuel Mikros; Aldo Tarricone; Andrea Musacchio; S Mark Roe; Laurence Pearl; Maryse Leost; Paul Greengard; Laurent Meijer
Journal:  J Med Chem       Date:  2004-02-12       Impact factor: 7.446

10.  Discovery of a novel styrene monooxygenase originating from the metagenome.

Authors:  Erik W van Hellemond; Dick B Janssen; Marco W Fraaije
Journal:  Appl Environ Microbiol       Date:  2007-07-20       Impact factor: 4.792

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  6 in total

1.  Assessing directed evolution methods for the generation of biosynthetic enzymes with potential in drug biosynthesis.

Authors:  David P Nannemann; William R Birmingham; Robert A Scism; Brian O Bachmann
Journal:  Future Med Chem       Date:  2011-05       Impact factor: 3.808

2.  Human cytochrome P450 17A1 conformational selection: modulation by ligand and cytochrome b5.

Authors:  D Fernando Estrada; Andria L Skinner; Jennifer S Laurence; Emily E Scott
Journal:  J Biol Chem       Date:  2014-03-26       Impact factor: 5.157

Review 3.  Engineering cytochrome P450 biocatalysts for biotechnology, medicine and bioremediation.

Authors:  Santosh Kumar
Journal:  Expert Opin Drug Metab Toxicol       Date:  2010-02       Impact factor: 4.481

4.  Characterization of a novel phenol hydroxylase in indoles biotransformation from a strain Arthrobacter sp. W1 [corrected].

Authors:  Yuanyuan Qu; Shengnan Shi; Hao Zhou; Qiao Ma; Xinliang Li; Xuwang Zhang; Jiti Zhou
Journal:  PLoS One       Date:  2012-09-13       Impact factor: 3.240

5.  Detoxification of Indole by an Indole-Induced Flavoprotein Oxygenase from Acinetobacter baumannii.

Authors:  Guang-Huey Lin; Hao-Ping Chen; Hung-Yu Shu
Journal:  PLoS One       Date:  2015-09-21       Impact factor: 3.240

6.  Analysis of Cytochrome P450 Conserved Sequence Motifs between Helices E and H: Prediction of Critical Motifs and Residues in Enzyme Functions.

Authors:  Numan Oezguen; Santosh Kumar
Journal:  J Drug Metab Toxicol       Date:  2011-08-30
  6 in total

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