Literature DB >> 15958043

Prospects for urinary proteomics: exosomes as a source of urinary biomarkers.

Ewout J Hoorn1, Trairak Pisitkun, Robert Zietse, Peter Gross, Joergen Frokiaer, Nam Sun Wang, Patricia A Gonzales, Robert A Star, Mark A Knepper.   

Abstract

Recent progress in biotechnology offers the promise of better medical care at lower costs. Among the techniques that show the greatest promise is mass spectrometry of proteins, which can identify proteins present in body fluids and tissue specimens at a large scale. Because urine can be collected in large amounts in a non-invasive fashion, the potential exists to use mass spectrometry to discover urinary biomarkers that are early predictors of renal disease, or useful in making therapeutic choices. Recently, the authors demonstrated that both membrane proteins and cytosolic proteins from renal epithelia are highly enriched in low-density urinary structures identified as exosomes. Exosomes were found to contain many disease-associated proteins including aquaporin-2, polycystin-1, podocin, non-muscle myosin II, angiotensin-converting enzyme, Na+ K+ 2Cl- cotransporter (NKCC2), thiazide-sensitive Na-Cl cotransporter (NCC), and epithelial sodium channel (ENaC). Potentially, other disease biomarkers could be discovered by mass spectrometry-based proteomic studies in well-defined patient populations. Herein is described the advantages of using urinary exosomes as a starting material for biomarker discovery. In addition, the purpose of this review is to present an overall strategy for biomarker discovery in urine using exosomes and for developing cost-effective clinical assays for these biomarkers, which can potentially be used for early detection of disease, as a means of differential diagnosis, or as a means of guiding therapy. Finally, potential barriers that need to be overcome before urinary proteomics can be applied clinically, are emphasized.

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Year:  2005        PMID: 15958043     DOI: 10.1111/j.1440-1797.2005.00387.x

Source DB:  PubMed          Journal:  Nephrology (Carlton)        ISSN: 1320-5358            Impact factor:   2.506


  57 in total

1.  Fluorescent labeling of nano-sized vesicles released by cells and subsequent quantitative and qualitative analysis by high-resolution flow cytometry.

Authors:  Els J van der Vlist; Esther N M Nolte-'t Hoen; Willem Stoorvogel; Ger J A Arkesteijn; Marca H M Wauben
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Review 2.  The application of mass-spectrometry-based protein biomarker discovery to theragnostics.

Authors:  Jonathan M Street; James W Dear
Journal:  Br J Clin Pharmacol       Date:  2010-04       Impact factor: 4.335

Review 3.  Proteomics characterization of exosome cargo.

Authors:  Kevin L Schey; J Matthew Luther; Kristie L Rose
Journal:  Methods       Date:  2015-03-31       Impact factor: 3.608

4.  Collection, storage, preservation, and normalization of human urinary exosomes for biomarker discovery.

Authors:  H Zhou; P S T Yuen; T Pisitkun; P A Gonzales; H Yasuda; J W Dear; P Gross; M A Knepper; R A Star
Journal:  Kidney Int       Date:  2006-04       Impact factor: 10.612

5.  Autosomal recessive polycystic kidney disease and congenital hepatic fibrosis: summary statement of a first National Institutes of Health/Office of Rare Diseases conference.

Authors:  Meral Gunay-Aygun; Ellis D Avner; Robert L Bacallao; Peter L Choyke; Joseph T Flynn; Gregory G Germino; Lisa Guay-Woodford; Peter Harris; Theo Heller; Julie Ingelfinger; Frederick Kaskel; Robert Kleta; Nicholas F LaRusso; Parvathi Mohan; Gregory J Pazour; Benjamin L Shneider; Vicente E Torres; Patricia Wilson; Colleen Zak; Jing Zhou; William A Gahl
Journal:  J Pediatr       Date:  2006-08       Impact factor: 4.406

Review 6.  The sodium chloride cotransporter SLC12A3: new roles in sodium, potassium, and blood pressure regulation.

Authors:  Arthur D Moes; Nils van der Lubbe; Robert Zietse; Johannes Loffing; Ewout J Hoorn
Journal:  Pflugers Arch       Date:  2013-12-06       Impact factor: 3.657

7.  T cell-induced secretion of MHC class II-peptide complexes on B cell exosomes.

Authors:  Aura Muntasell; Adam C Berger; Paul A Roche
Journal:  EMBO J       Date:  2007-09-06       Impact factor: 11.598

Review 8.  Urinary proteomics as a novel tool for biomarker discovery in kidney diseases.

Authors:  Jing Wu; Yi-ding Chen; Wei Gu
Journal:  J Zhejiang Univ Sci B       Date:  2010-04       Impact factor: 3.066

9.  Purification of exosome-like vesicles from urine.

Authors:  Christopher Y Chen; Marie C Hogan; Christopher J Ward
Journal:  Methods Enzymol       Date:  2013       Impact factor: 1.600

10.  Large-scale proteomics and phosphoproteomics of urinary exosomes.

Authors:  Patricia A Gonzales; Trairak Pisitkun; Jason D Hoffert; Dmitry Tchapyjnikov; Robert A Star; Robert Kleta; Nam Sun Wang; Mark A Knepper
Journal:  J Am Soc Nephrol       Date:  2008-12-03       Impact factor: 10.121

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