Literature DB >> 15954758

Chemoselective covalent coupling of oligonucleotide probes to self-assembled monolayers.

Neal K Devaraj1, Gregory P Miller, Wataru Ebina, Boyko Kakaradov, James P Collman, Eric T Kool, Christopher E D Chidsey.   

Abstract

A chemoselective route to routinely and rapidly attach oligonucleotide probes to well-defined surfaces is presented. Cu(I) tris(benzyltriazolylmethyl)amine-catalyzed coupling of terminal acetylenes to azides on a self-assembled monolayer is used instead of traditional nucleophilic-electrophilic coupling reactions. The reaction proceeds well even in the presence of purposely introduced nucleophilic and electrophilic impurities. The density of oligonucleotide probes can be controlled by controlling the amount of azide functionality. Although most of our work was done on gold surfaces, this technique should be readily applicable to any surface on which an azide-containing monolayer can be assembled as we have preliminarily demonstrated by derivatizing azidotrimethoxysilane-modified glass slides with fluorescein-containing oligonucleotides.

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Year:  2005        PMID: 15954758      PMCID: PMC3431914          DOI: 10.1021/ja051462l

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  19 in total

Review 1.  Advances in the analysis of DNA sequence variations using oligonucleotide microchip technology.

Authors:  S V Tillib; A D Mirzabekov
Journal:  Curr Opin Biotechnol       Date:  2001-02       Impact factor: 9.740

2.  Rapid diversity-oriented synthesis in microtiter plates for in situ screening of HIV protease inhibitors.

Authors:  Ashraf Brik; John Muldoon; Ying-Chuan Lin; John H Elder; David S Goodsell; Arthur J Olson; Valery V Fokin; K Bary Sharpless; Chi-Huey Wong
Journal:  Chembiochem       Date:  2003-11-07       Impact factor: 3.164

3.  A simple method for electrophilic functionalization of DNA.

Authors:  Gregory P Miller; Eric T Kool
Journal:  Org Lett       Date:  2002-10-17       Impact factor: 6.005

4.  Immobilization of amine-modified oligonucleotides on aldehyde-terminated alkanethiol monolayers on gold.

Authors:  Dora Peelen; Lloyd M Smith
Journal:  Langmuir       Date:  2005-01-04       Impact factor: 3.882

5.  Click chemistry to construct fluorescent oligonucleotides for DNA sequencing.

Authors:  Tae Seok Seo; Zengmin Li; Hameer Ruparel; Jingyue Ju
Journal:  J Org Chem       Date:  2003-01-24       Impact factor: 4.354

6.  Covalent display of oligosaccharide arrays in microtiter plates.

Authors:  Marian C Bryan; Fabio Fazio; Hing-Ken Lee; Cheng-Yuan Huang; Aileen Chang; Michael D Best; Daniel A Calarese; Ola Blixt; James C Paulson; Dennis Burton; Ian A Wilson; Chi-Huey Wong
Journal:  J Am Chem Soc       Date:  2004-07-21       Impact factor: 15.419

7.  Electrochemical quantitation of DNA immobilized on gold.

Authors:  A B Steel; T M Herne; M J Tarlov
Journal:  Anal Chem       Date:  1998-11-15       Impact factor: 6.986

8.  Photocleavable fluorescent nucleotides for DNA sequencing on a chip constructed by site-specific coupling chemistry.

Authors:  Tae Seok Seo; Xiaopeng Bai; Hameer Ruparel; Zengmin Li; Nicholas J Turro; Jingyue Ju
Journal:  Proc Natl Acad Sci U S A       Date:  2004-04-02       Impact factor: 11.205

9.  Affinity mass spectrometry from a tailored porous silicon surface.

Authors:  Jun-Cai Meng; Gary Siuzdak; M G Finn
Journal:  Chem Commun (Camb)       Date:  2004-08-05       Impact factor: 6.222

10.  Site-specific DNA damage induced by NADH in the presence of copper(II): role of active oxygen species.

Authors:  S Oikawa; S Kawanishi
Journal:  Biochemistry       Date:  1996-04-09       Impact factor: 3.162

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  15 in total

Review 1.  Applications of orthogonal "click" chemistries in the synthesis of functional soft materials.

Authors:  Rhiannon K Iha; Karen L Wooley; Andreas M Nyström; Daniel J Burke; Matthew J Kade; Craig J Hawker
Journal:  Chem Rev       Date:  2009-11       Impact factor: 60.622

2.  A Multiplexed, Two-Electrode Platform for Biosensing Based on DNA-Mediated Charge Transport.

Authors:  Ariel L Furst; Michael G Hill; Jacqueline K Barton
Journal:  Langmuir       Date:  2015-06-04       Impact factor: 3.882

3.  Rate of interfacial electron transfer through the 1,2,3-triazole linkage.

Authors:  Neal K Devaraj; Richard A Decreau; Wataru Ebina; James P Collman; Christopher E D Chidsey
Journal:  J Phys Chem B       Date:  2006-08-17       Impact factor: 2.991

Review 4.  Signal Improvement Strategies for Fluorescence Detection of Biomacromolecules.

Authors:  Chengxin Luan; Zixue Yang; Baoan Chen
Journal:  J Fluoresc       Date:  2016-04-11       Impact factor: 2.217

5.  Strain-promoted "click" chemistry for terminal labeling of DNA.

Authors:  Isaac S Marks; Jun Sung Kang; Brady T Jones; Kevin J Landmark; Andrew J Cleland; T Andrew Taton
Journal:  Bioconjug Chem       Date:  2011-06-02       Impact factor: 4.774

6.  Electrochemical patterning and detection of DNA arrays on a two-electrode platform.

Authors:  Ariel Furst; Sally Landefeld; Michael G Hill; Jacqueline K Barton
Journal:  J Am Chem Soc       Date:  2013-12-12       Impact factor: 15.419

7.  DNA-modified electrodes fabricated using copper-free click chemistry for enhanced protein detection.

Authors:  Ariel L Furst; Michael G Hill; Jacqueline K Barton
Journal:  Langmuir       Date:  2013-12-11       Impact factor: 3.882

8.  Using "click" chemistry to prepare SAM substrates to study stem cell adhesion.

Authors:  Gregory A Hudalla; William L Murphy
Journal:  Langmuir       Date:  2009-05-19       Impact factor: 3.882

9.  Mixed azide-terminated monolayers: a platform for modifying electrode surfaces.

Authors:  James P Collman; Neal K Devaraj; Todd P A Eberspacher; Christopher E D Chidsey
Journal:  Langmuir       Date:  2006-03-14       Impact factor: 3.882

10.  Selective functionalization of independently addressed microelectrodes by electrochemical activation and deactivation of a coupling catalyst.

Authors:  Neal K Devaraj; Peter H Dinolfo; Christopher E D Chidsey; James P Collman
Journal:  J Am Chem Soc       Date:  2006-02-15       Impact factor: 15.419

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