Literature DB >> 15930615

A procedure for setting up high-throughput nanolitre crystallization experiments. Crystallization workflow for initial screening, automated storage, imaging and optimization.

Thomas S Walter1, Jonathan M Diprose, Chris J Mayo, Christian Siebold, Mike G Pickford, Lester Carter, Geoff C Sutton, Nick S Berrow, James Brown, Ian M Berry, Guillaume B E Stewart-Jones, Jonathan M Grimes, David K Stammers, Robert M Esnouf, E Yvonne Jones, Ray J Owens, David I Stuart, Karl Harlos.   

Abstract

Crystallization trials at the Division of Structural Biology in Oxford are now almost exclusively carried out using a high-throughput workflow implemented in the Oxford Protein Production Facility. Initial crystallization screening is based on nanolitre-scale sitting-drop vapour-diffusion experiments (typically 100 nl of protein plus 100 nl of reservoir solution per droplet) which use standard crystallization screening kits and 96-well crystallization plates. For 294 K crystallization trials the barcoded crystallization plates are entered into an automated storage system with a fully integrated imaging system. These plates are imaged in accordance with a pre-programmed schedule and the resulting digital data for each droplet are harvested into a laboratory information-management system (LIMS), scored by crystal recognition software and displayed for user analysis via a web-based interface. Currently, storage for trials at 277 K is not automated and for imaging the crystallization plates are fed by hand into an imaging system from which the data enter the LIMS. The workflow includes two procedures for nanolitre-scale optimization of crystallization conditions: (i) a protocol for variation of pH, reservoir dilution and protein:reservoir ratio and (ii) an additive screen. Experience based on 592 crystallization projects is reported.

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Year:  2005        PMID: 15930615      PMCID: PMC7159505          DOI: 10.1107/S0907444905007808

Source DB:  PubMed          Journal:  Acta Crystallogr D Biol Crystallogr        ISSN: 0907-4449


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  162 in total

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