Literature DB >> 15893724

Sequence of steps in ribosome recycling as defined by kinetic analysis.

Frank Peske1, Marina V Rodnina, Wolfgang Wintermeyer.   

Abstract

After termination of protein synthesis in bacteria, ribosomes are recycled from posttermination complexes by the combined action of elongation factor G (EF-G), ribosome recycling factor (RRF), and initiation factor 3 (IF3). The functions of the factors and the sequence in which ribosomal subunits, tRNA, and mRNA are released from posttermination complexes are unclear and, in part, controversial. Here, we study the reaction by rapid kinetics monitoring fluorescence. We show that RRF and EF-G with GTP, but not with GDPNP, promote the dissociation of 50S subunits from the posttermination complex without involving translocation or a translocation-like event. IF3 does not affect subunit dissociation but prevents reassociation, thereby masking the dissociating effect of EF-G-RRF under certain experimental conditions. IF3 is required for the subsequent ejection of tRNA and mRNA from the small subunit. The latter step is slower than subunit dissociation and constitutes the rate-limiting step of ribosome recycling.

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Year:  2005        PMID: 15893724     DOI: 10.1016/j.molcel.2005.04.009

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  65 in total

1.  Ribosome recycling step in yeast cytoplasmic protein synthesis is catalyzed by eEF3 and ATP.

Authors:  Shinya Kurata; Klaus H Nielsen; Sarah F Mitchell; Jon R Lorsch; Akira Kaji; Hideko Kaji
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

2.  Kinetic analysis reveals the ordered coupling of translation termination and ribosome recycling in yeast.

Authors:  Christopher J Shoemaker; Rachel Green
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

3.  Structural insights into initial and intermediate steps of the ribosome-recycling process.

Authors:  Takeshi Yokoyama; Tanvir R Shaikh; Nobuhiro Iwakura; Hideko Kaji; Akira Kaji; Rajendra K Agrawal
Journal:  EMBO J       Date:  2012-03-02       Impact factor: 11.598

4.  Destabilization of the P site codon-anticodon helix results from movement of tRNA into the P/E hybrid state within the ribosome.

Authors:  Kevin G McGarry; Sarah E Walker; Huanyu Wang; Kurt Fredrick
Journal:  Mol Cell       Date:  2005-11-23       Impact factor: 17.970

Review 5.  Mechanism of recycling of post-termination ribosomal complexes in eubacteria: a new role of initiation factor 3.

Authors:  Anuradha Seshadri; Umesh Varshney
Journal:  J Biosci       Date:  2006-06       Impact factor: 1.826

6.  How initiation factors tune the rate of initiation of protein synthesis in bacteria.

Authors:  Ayman Antoun; Michael Y Pavlov; Martin Lovmar; Måns Ehrenberg
Journal:  EMBO J       Date:  2006-05-25       Impact factor: 11.598

7.  The mechanism of an exceptional case of reinitiation after translation of a long ORF reveals why such events do not generally occur in mammalian mRNA translation.

Authors:  Tuija A A Pöyry; Ann Kaminski; Emma J Connell; Christopher S Fraser; Richard J Jackson
Journal:  Genes Dev       Date:  2007-12-01       Impact factor: 11.361

8.  A model for the origin of protein synthesis as coreplicational scanning of nascent RNA.

Authors:  Alexander V Yakhnin
Journal:  Orig Life Evol Biosph       Date:  2007-09-20       Impact factor: 1.950

9.  Pneumococcal RNase R globally impacts protein synthesis by regulating the amount of actively translating ribosomes.

Authors:  Cátia Bárria; Susana Domingues; Cecília Maria Arraiano
Journal:  RNA Biol       Date:  2019-01-13       Impact factor: 4.652

10.  Specific interaction between EF-G and RRF and its implication for GTP-dependent ribosome splitting into subunits.

Authors:  Ning Gao; Andrey V Zavialov; Måns Ehrenberg; Joachim Frank
Journal:  J Mol Biol       Date:  2007-10-16       Impact factor: 5.469

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