Literature DB >> 15853331

Ab initio studies on the radiationless decay mechanisms of the lowest excited singlet states of 9H-adenine.

Serhiy Perun1, Andrzej L Sobolewski, Wolfgang Domcke.   

Abstract

The mechanisms that are responsible for the rapid deactivation of the (1)npi and( 1)pipi excited singlet states of the 9H isomer of adenine have been investigated with multireference ab initio methods (complete-active-space self-consistent-field (CASSCF) method and second-order perturbation theory based on the CASSCF reference (CASPT2)). Two novel photochemical pathways, which lead to conical intersections of the S(1) excited potential-energy surface with the electronic ground-state surface, have been identified. They involve out-of-plane deformations of the six-membered aromatic ring via the twisting of the N(3)C(2) and N(1)C(6) bonds. These low-lying conical intersections are separated from the minimum energy of the lowest ((1)npi) excited state in the Franck-Condon region by very low energy barriers (of the order of 0.1 eV). These properties of the S(1) and S(0) potential-energy surfaces explain the unusual laser-induced fluorescence spectrum of jet-cooled 9H-adenine, showing sharp structures only in a narrow energy interval near the origin, as well as the extreme excess-energy dependence of the lifetime of the singlet excited states. It is suggested that internal-conversion processes via conical intersections, which are accessed by out-of-plane deformation of the six-membered ring, dominate the photophysics of the lowest vibronic levels of adenine in the gas phase, while hydrogen-abstraction photochemistry driven by repulsive (1)pisigma states may become competitive at higher excitation energies. These ultrafast excited-state deactivation processes provide adenine with a high degree of intrinsic photostability.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15853331     DOI: 10.1021/ja044321c

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  19 in total

1.  Primary processes underlying the photostability of isolated DNA bases: adenine.

Authors:  Helmut Satzger; Dave Townsend; Marek Z Zgierski; Serguei Patchkovskii; Susanne Ullrich; Albert Stolow
Journal:  Proc Natl Acad Sci U S A       Date:  2006-06-27       Impact factor: 11.205

2.  Internal conversion to the electronic ground state occurs via two distinct pathways for pyrimidine bases in aqueous solution.

Authors:  Patrick M Hare; Carlos E Crespo-Hernández; Bern Kohler
Journal:  Proc Natl Acad Sci U S A       Date:  2006-12-29       Impact factor: 11.205

3.  Influence of base stacking on excited-state behavior of polyadenine in water, based on time-dependent density functional calculations.

Authors:  F Santoro; V Barone; R Improta
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-01       Impact factor: 11.205

4.  Adenine and 2-aminopurine: paradigms of modern theoretical photochemistry.

Authors:  Luis Serrano-Andrés; Manuela Merchán; Antonio C Borin
Journal:  Proc Natl Acad Sci U S A       Date:  2006-05-26       Impact factor: 11.205

5.  Exciplexes and conical intersections lead to fluorescence quenching in π-stacked dimers of 2-aminopurine with natural purine nucleobases.

Authors:  JingXin Liang; Quynh L Nguyen; Spiridoula Matsika
Journal:  Photochem Photobiol Sci       Date:  2013-08       Impact factor: 3.982

6.  Relaxation mechanisms of UV-photoexcited DNA and RNA nucleobases.

Authors:  Mario Barbatti; Adélia J A Aquino; Jaroslaw J Szymczak; Dana Nachtigallová; Pavel Hobza; Hans Lischka
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-29       Impact factor: 11.205

7.  Time-dependent density functional theory study of the excited-state dihydrogen bonding: clusters of 2-pyridone with diethylmethylsilane and triethylgermanium.

Authors:  Ning-Ning Wei; Ce Hao; Jiao-Jie Tan; Guangyan Zhao; Ruizhou Li; Zhilong Xiu; Jieshan Qiu
Journal:  J Mol Model       Date:  2010-11-24       Impact factor: 1.810

8.  On the origin of life in the zinc world: 1. Photosynthesizing, porous edifices built of hydrothermally precipitated zinc sulfide as cradles of life on Earth.

Authors:  Armen Y Mulkidjanian
Journal:  Biol Direct       Date:  2009-08-24       Impact factor: 4.540

9.  Monitoring Non-Adiabatic Dynamics of the RNA Base Uracil by UV-Pump-IR-Probe Spectroscopy.

Authors:  Benjamin P Fingerhut; Konstantin E Dorfman; Shaul Mukamel
Journal:  J Phys Chem Lett       Date:  2013-06-06       Impact factor: 6.475

10.  Comparison of Spin-Flip TDDFT-Based Conical Intersection Approaches with XMS-CASPT2.

Authors:  Max Winslow; Warren B Cross; David Robinson
Journal:  J Chem Theory Comput       Date:  2020-05-04       Impact factor: 6.006

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.