Literature DB >> 15829235

Advances in sequencing technology.

Eugene Y Chan1.   

Abstract

Faster sequencing methods will undoubtedly lead to faster single nucleotide polymorphism (SNP) discovery. The Sanger method has served as the cornerstone for genome sequence production since 1977, close to almost 30 years of tremendous utility [Sanger, F., Nicklen, S., Coulson, A.R, DNA sequencing with chain-terminating inhibitors, Proc. Natl. Acad. Sci. U.S.A. 74 (1977) 5463-5467]. With the completion of the human genome sequence [Venter, J.C. et al., The sequence of the human genome, Science 291 (2001) 1304-1351; Lander, E.S. et al., Initial sequencing and analysis of the human genome, Nature 409 (2001) 860-921], there is now a focus on developing new sequencing methodologies that will enable "personal genomics", or the routine study of our individual genomes. Technologies that will lead us to this lofty goal are those that can provide improvements in three areas: read length, throughput, and cost. As progress is made in this field, large sections of genomes and then whole genomes of individuals will become increasingly more facile to sequence. SNP discovery efforts will be enhanced lock-step with these improvements. Here, the breadth of new sequencing approaches will be summarized including their status and prospects for enabling personal genomics.

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Year:  2005        PMID: 15829235     DOI: 10.1016/j.mrfmmm.2005.01.004

Source DB:  PubMed          Journal:  Mutat Res        ISSN: 0027-5107            Impact factor:   2.433


  33 in total

1.  On the Feasibility of Using the Intrinsic Fluorescence of Nucleotides for DNA Sequencing.

Authors:  Mustafa H Chowdhury; Krishanu Ray; Michael L Johnson; Stephen K Gray; James Pond; Joseph R Lakowicz
Journal:  J Phys Chem C Nanomater Interfaces       Date:  2010-04-29       Impact factor: 4.126

2.  Fast DNA sequencing via transverse electronic transport.

Authors:  Johan Lagerqvist; Michael Zwolak; Massimiliano Di Ventra
Journal:  Nano Lett       Date:  2006-04       Impact factor: 11.189

3.  Identification of DNA basepairing via tunnel-current decay.

Authors:  Jin He; Lisha Lin; Peiming Zhang; Stuart Lindsay
Journal:  Nano Lett       Date:  2007-11-28       Impact factor: 11.189

4.  Applying rapid genome sequencing technologies to characterize pathogen genomes.

Authors:  Karyn Meltz Steinberg; David T Okou; Michael E Zwick
Journal:  Anal Chem       Date:  2008-02-01       Impact factor: 6.986

5.  Polymer systems designed specifically for DNA sequencing by microchip electrophoresis: a comparison with commercially available materials.

Authors:  Christopher P Fredlake; Daniel G Hert; Brian E Root; Annelise E Barron
Journal:  Electrophoresis       Date:  2008-12       Impact factor: 3.535

Review 6.  Direct mutation analysis by high-throughput sequencing: from germline to low-abundant, somatic variants.

Authors:  Michael Gundry; Jan Vijg
Journal:  Mutat Res       Date:  2011-10-12       Impact factor: 2.433

Review 7.  Discovery and verification of functional single nucleotide polymorphisms in regulatory genomic regions: current and developing technologies.

Authors:  Brian N Chorley; Xuting Wang; Michelle R Campbell; Gary S Pittman; Maher A Noureddine; Douglas A Bell
Journal:  Mutat Res       Date:  2008-05-04       Impact factor: 2.433

8.  SPECIATION IN MAMMALS AND THE GENETIC SPECIES CONCEPT.

Authors:  Robert J Baker; Robert D Bradley
Journal:  J Mammal       Date:  2006-08-01       Impact factor: 2.416

9.  A molecular dynamics simulation study on trapping ions in a nanoscale Paul trap.

Authors:  Xiongce Zhao; Predrag S Krstic
Journal:  Nanotechnology       Date:  2008-04-08       Impact factor: 3.874

10.  Enzyme-modulated DNA translocation through a nanopore.

Authors:  Ajay S Panwar; M Muthukumar
Journal:  J Am Chem Soc       Date:  2009-12-30       Impact factor: 15.419

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