Literature DB >> 15825150

Versatile protein microarray based on carbohydrate-binding modules.

Keren Ofir1, Yevgeny Berdichevsky, Itai Benhar, Ronit Azriel-Rosenfeld, Raphael Lamed, Yoav Barak, Edward A Bayer, Ely Morag.   

Abstract

Non-DNA microarrays, such as protein, peptide and small molecule microarrays, can potentially revolutionize the high-throughput screening tools currently used in basic and pharmaceutical research. However, fundamental obstacles remain that limit their rapid and widespread implementation as an alternative bioanalytical approach. These include the prerequisite for numerous proteins in active and purified form, ineffectual immobilization strategies and inadequate means for quality control of the considerable numbers of multiple reagents. This study describes a simple yet efficient strategy for the production of non-DNA microarrays, based on the tenacious affinity of a carbohydrate-binding module (CBM) for its three-dimensional substrate, i.e., cellulose. Various microarray formats are described, e.g., conventional and single-chain antibody microarrays and peptide microarrays for serodiagnosis of human immunodeficiency virus patients. CBM-based microarray technology overcomes many of the previous obstacles that have hindered fabrication of non-DNA microarrays and provides a technically simple but effective alternative to conventional microarray technology.

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Year:  2005        PMID: 15825150     DOI: 10.1002/pmic.200401078

Source DB:  PubMed          Journal:  Proteomics        ISSN: 1615-9853            Impact factor:   3.984


  12 in total

1.  The ABRF MARG microarray survey 2005: taking the pulse of the microarray field.

Authors:  Kevin L Knudtson; Herbert Auer; Andrew I Brooks; Chandi Griffin; George Grills; Susan Hester; Gregory Khitrov; Kathryn S Lilley; Aldo Massimi; Jay P Tiesman; Agnes Viale
Journal:  J Biomol Tech       Date:  2006-04

2.  On the remarkable mechanostability of scaffoldins and the mechanical clamp motif.

Authors:  Alejandro Valbuena; Javier Oroz; Rubén Hervás; Andrés Manuel Vera; David Rodríguez; Margarita Menéndez; Joanna I Sulkowska; Marek Cieplak; Mariano Carrión-Vázquez
Journal:  Proc Natl Acad Sci U S A       Date:  2009-07-31       Impact factor: 11.205

Review 3.  Site-selective orientated immobilization of antibodies and conjugates for immunodiagnostics development.

Authors:  Min Shen; Chandra K Dixit; James Rusling
Journal:  Methods       Date:  2016-11-19       Impact factor: 3.608

Review 4.  Carbohydrate binding modules: biochemical properties and novel applications.

Authors:  Oded Shoseyov; Ziv Shani; Ilan Levy
Journal:  Microbiol Mol Biol Rev       Date:  2006-06       Impact factor: 11.056

5.  Stability and Ligand Promiscuity of Type A Carbohydrate-binding Modules Are Illustrated by the Structure of Spirochaeta thermophila StCBM64C.

Authors:  Virgínia M R Pires; Pedro M M Pereira; Joana L A Brás; Márcia Correia; Vânia Cardoso; Pedro Bule; Victor D Alves; Shabir Najmudin; Immacolata Venditto; Luís M A Ferreira; Maria João Romão; Ana Luísa Carvalho; Carlos M G A Fontes; Duarte Miguel Prazeres
Journal:  J Biol Chem       Date:  2017-02-08       Impact factor: 5.157

6.  Recombinant Protein Purification using Composite Polyacrylamide-Nanocrystalline Cryogel Monolith Column and Carbohydrate-Binding Module Family 64 as Affinity Tag.

Authors:  Mohsen Danaeifar; Ziba Veisi Malekshahi; Fatemeh Kazemi-Lomedasht; Mohammad Ali Mazlomi
Journal:  Rep Biochem Mol Biol       Date:  2022-07

7.  Elaborate cellulosome architecture of Acetivibrio cellulolyticus revealed by selective screening of cohesin-dockerin interactions.

Authors:  Yuval Hamberg; Vered Ruimy-Israeli; Bareket Dassa; Yoav Barak; Raphael Lamed; Kate Cameron; Carlos M G A Fontes; Edward A Bayer; Daniel B Fried
Journal:  PeerJ       Date:  2014-10-30       Impact factor: 2.984

8.  Orientated Immobilization of FAD-Dependent Glucose Dehydrogenase on Electrode by Carbohydrate-Binding Module Fusion for Efficient Glucose Assay.

Authors:  Qingye Han; Weili Gong; Zhenyu Zhang; Lushan Wang; Binglian Wang; Lei Cai; Qingjun Meng; Yiwei Li; Qingai Liu; Yan Yang; Lan Zheng; Yaohong Ma
Journal:  Int J Mol Sci       Date:  2021-05-24       Impact factor: 5.923

9.  Deciphering ligand specificity of a Clostridium thermocellum family 35 carbohydrate binding module (CtCBM35) for gluco- and galacto- substituted mannans and its calcium induced stability.

Authors:  Arabinda Ghosh; Ana Sofia Luís; Joana L A Brás; Neeta Pathaw; Nikhil K Chrungoo; Carlos M G A Fontes; Arun Goyal
Journal:  PLoS One       Date:  2013-12-06       Impact factor: 3.240

Review 10.  Protein microarrays: a chance to study microorganisms?

Authors:  Jürgen Kreutzberger
Journal:  Appl Microbiol Biotechnol       Date:  2006-02-18       Impact factor: 4.813

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