Literature DB >> 15803413

The Fed-1 (CAUU)4 element is a 5' UTR dark-responsive mRNA instability element that functions independently of dark-induced polyribosome dissociation.

Sumana Bhat1, Li Tang, Angela D Krueger, Christopher L Smith, Sharon R Ford, Lynn F Dickey, Marie E Petracek.   

Abstract

Darkness rapidly induces a decline in the stability and translation of the pea Ferredoxin-1 (Fed-1) mRNA in transgenic tobacco. Direct half-life measurement showed that mutation of the (CAUU)4 stabilizes Fed-1 mRNA in the dark. (CAUU)1, a feature more common in plant 5' UTRs than (CAUU)4, confers slight light-responsive mRNA accumulation. At least three but less than 11 CAUU repeats near the 5' end of the 5' UTR are required for full light-responsive accumulation. Furthermore, 26 nt of the 5' UTR, including the (CAUU)4 repeat, is sufficient to confer a significant approximately 2.5-fold increase in light-regulated mRNA accumulation when fused to the 5' end of a heterologous plant mRNA. A mutation of the (CAUU)4 repeat that compromises light-regulated mRNA stability changes in vitro the accessibility of the region to ribonuclease V1 and ribonuclease A suggesting the geometry formed by the repeat may be important for instability. Finally, dark-induced Fed-1 mRNA instability occurs even when most of the mRNA is retained on polyribosomes, and thus is likely an independent event regulated by darkness.

Entities:  

Mesh:

Substances:

Year:  2005        PMID: 15803413     DOI: 10.1007/s11103-004-5109-8

Source DB:  PubMed          Journal:  Plant Mol Biol        ISSN: 0167-4412            Impact factor:   4.076


  40 in total

1.  Current perspectives on mRNA stability in plants: multiple levels and mechanisms of control.

Authors: 
Journal:  Trends Plant Sci       Date:  1999-11       Impact factor: 18.313

Review 2.  Post-transcriptional light regulation of nuclear-encoded genes.

Authors:  M E Petracek; W F Thompson
Journal:  Genet Eng (N Y)       Date:  2000

3.  cis-Acting Elements for Light Regulation of Pea Ferredoxin I Gene Expression Are Located within Transcribed Sequences.

Authors:  R. C. Elliott; L. F. Dickey; M. J. White; W. F. Thompson
Journal:  Plant Cell       Date:  1989-07       Impact factor: 11.277

4.  Selective degradation of AU-rich mRNAs promoted by the p37 AUF1 protein isoform.

Authors:  Bedabrata Sarkar; Qiaoran Xi; Cheng He; Robert J Schneider
Journal:  Mol Cell Biol       Date:  2003-09       Impact factor: 4.272

5.  Rare codons are not sufficient to destabilize a reporter gene transcript in tobacco.

Authors:  A van Hoof; P J Green
Journal:  Plant Mol Biol       Date:  1997-10       Impact factor: 4.076

6.  AU binding proteins recruit the exosome to degrade ARE-containing mRNAs.

Authors:  C Y Chen; R Gherzi; S E Ong; E L Chan; R Raijmakers; G J Pruijn; G Stoecklin; C Moroni; M Mann; M Karin
Journal:  Cell       Date:  2001-11-16       Impact factor: 41.582

7.  Novel inducible/repressible gene expression systems.

Authors:  C Gatz
Journal:  Methods Cell Biol       Date:  1995       Impact factor: 1.441

8.  Regulation of c-myc mRNA decay by translational pausing in a coding region instability determinant.

Authors:  Ira Lemm; Jeff Ross
Journal:  Mol Cell Biol       Date:  2002-06       Impact factor: 4.272

9.  Light control of nuclear gene mRNA abundance and translation in tobacco.

Authors:  Li Tang; Sumana Bhat; Marie E Petracek
Journal:  Plant Physiol       Date:  2003-12       Impact factor: 8.340

10.  Phototropin 1 is required for high-fluence blue-light-mediated mRNA destabilization.

Authors:  Kevin M Folta; Lon S Kaufman
Journal:  Plant Mol Biol       Date:  2003-03       Impact factor: 4.076

View more
  8 in total

1.  Translational Regulation of Cytoplasmic mRNAs.

Authors:  Bijoyita Roy; Albrecht G von Arnim
Journal:  Arabidopsis Book       Date:  2013-07-18

2.  Boron-dependent degradation of NIP5;1 mRNA for acclimation to excess boron conditions in Arabidopsis.

Authors:  Mayuki Tanaka; Junpei Takano; Yukako Chiba; Fabien Lombardo; Yuki Ogasawara; Hitoshi Onouchi; Satoshi Naito; Toru Fujiwara
Journal:  Plant Cell       Date:  2011-09-09       Impact factor: 11.277

3.  Carotenogenesis Is Regulated by 5'UTR-Mediated Translation of Phytoene Synthase Splice Variants.

Authors:  Daniel Álvarez; Björn Voß; Dirk Maass; Florian Wüst; Patrick Schaub; Peter Beyer; Ralf Welsch
Journal:  Plant Physiol       Date:  2016-10-11       Impact factor: 8.340

4.  CIRCADIAN CLOCK ASSOCIATED1 transcript stability and the entrainment of the circadian clock in Arabidopsis.

Authors:  Esther Yakir; Dror Hilman; Miriam Hassidim; Rachel M Green
Journal:  Plant Physiol       Date:  2007-09-14       Impact factor: 8.340

5.  Untranslated regions of a mobile transcript mediate RNA metabolism.

Authors:  Anjan K Banerjee; Tian Lin; David J Hannapel
Journal:  Plant Physiol       Date:  2009-09-25       Impact factor: 8.340

6.  Downstream promoter sequence of an Indian isolate of Rice tungro bacilliform virus alters tissue-specific expression in host rice and acts differentially in heterologous system.

Authors:  Saloni Mathur; Indranil Dasgupta
Journal:  Plant Mol Biol       Date:  2007-08-26       Impact factor: 4.076

7.  A novel adenylate isopentenyltransferase 5 regulates shoot branching via the ATTTA motif in Camellia sinensis.

Authors:  Liping Zhang; Menghan Li; Peng Yan; Jianyu Fu; Lan Zhang; Xin Li; Wenyan Han
Journal:  BMC Plant Biol       Date:  2021-11-09       Impact factor: 4.215

8.  Expression and functional analysis of CsA-IPT5 splice variants during shoot branching in Camellia sinensis.

Authors:  Liping Zhang; Donghui Wang; Lan Zhang; Jianyu Fu; Peng Yan; Shibei Ge; Zhengzhen Li; Golam Jalal Ahammed; Wenyan Han; Xin Li
Journal:  Front Plant Sci       Date:  2022-08-22       Impact factor: 6.627

  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.