Literature DB >> 10529824

Current perspectives on mRNA stability in plants: multiple levels and mechanisms of control.

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Abstract

The control of mRNA stability plays a fundamental role in the regulation of gene expression in plants and other eukaryotes. This control can be influenced by the basal mRNA decay machinery, sequence-specific decay components, and regulatory factors that respond to various stimuli. Important progress has been made towards the identification of some of these elements over the past several years. This is true particularly with respect to cis-acting sequences that control mRNA stability, the identification of which has been the focus of much of the initial work in the field. Characterization of mRNA fragments associated with post-transcriptional gene silencing and two plant transcripts that give rise to detectable decay intermediates have provided insight into the mRNA decay pathways. These, and other studies, are indicative of similarities, as well as of interesting differences between mRNA decay mechanisms in plants and yeast - the system that has been used for most of the pioneering work. Future studies in this area, particularly when enhanced by emerging genetic and genomic approaches, have tremendous potential to provide additional knowledge that is unique to plants or of broad significance.

Entities:  

Year:  1999        PMID: 10529824     DOI: 10.1016/s1360-1385(99)01484-3

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  45 in total

1.  Transcript lifetime is balanced between stabilizing stem-loop structures and degradation-promoting polyadenylation in plant mitochondria.

Authors:  J Kuhn; U Tengler; S Binder
Journal:  Mol Cell Biol       Date:  2001-02       Impact factor: 4.272

Review 2.  RNA degradation and models for post-transcriptional gene-silencing.

Authors:  F Meins
Journal:  Plant Mol Biol       Date:  2000-06       Impact factor: 4.076

3.  A minimal serine/threonine protein kinase circadianly regulates phosphoenolpyruvate carboxylase activity in crassulacean acid metabolism-induced leaves of the common ice plant.

Authors:  T Taybi; S Patil; R Chollet; J C Cushman
Journal:  Plant Physiol       Date:  2000-08       Impact factor: 8.340

4.  High-level accumulation of recombinant miraculin protein in transgenic tomatoes expressing a synthetic miraculin gene with optimized codon usage terminated by the native miraculin terminator.

Authors:  Kyoko Hiwasa-Tanase; Mpanja Nyarubona; Tadayoshi Hirai; Kazuhisa Kato; Takanari Ichikawa; Hiroshi Ezura
Journal:  Plant Cell Rep       Date:  2010-11-13       Impact factor: 4.570

5.  The Fed-1 (CAUU)4 element is a 5' UTR dark-responsive mRNA instability element that functions independently of dark-induced polyribosome dissociation.

Authors:  Sumana Bhat; Li Tang; Angela D Krueger; Christopher L Smith; Sharon R Ford; Lynn F Dickey; Marie E Petracek
Journal:  Plant Mol Biol       Date:  2005-03-24       Impact factor: 4.076

6.  The AtProT family. Compatible solute transporters with similar substrate specificity but differential expression patterns.

Authors:  Silke Grallath; Thilo Weimar; Andreas Meyer; Christophe Gumy; Marianne Suter-Grotemeyer; Jean-Marc Neuhaus; Doris Rentsch
Journal:  Plant Physiol       Date:  2004-12-23       Impact factor: 8.340

7.  Dark-induced mRNA instability involves RNase E/G-type endoribonuclease cleavage at the AU-box and SD sequences in cyanobacteria.

Authors:  Yoshinao Horie; Yoko Ito; Miyuki Ono; Naoko Moriwaki; Hideki Kato; Yuriko Hamakubo; Tomoki Amano; Masaaki Wachi; Makoto Shirai; Munehiko Asayama
Journal:  Mol Genet Genomics       Date:  2007-07-28       Impact factor: 3.291

8.  Reactive oxygen species mediate Na+-induced SOS1 mRNA stability in Arabidopsis.

Authors:  Jung-Sung Chung; Jian-Kang Zhu; Ray A Bressan; Paul M Hasegawa; Huazhong Shi
Journal:  Plant J       Date:  2007-11-07       Impact factor: 6.417

9.  Identification of unstable transcripts in Arabidopsis by cDNA microarray analysis: rapid decay is associated with a group of touch- and specific clock-controlled genes.

Authors:  Rodrigo A Gutierrez; Rob M Ewing; J Michael Cherry; Pamela J Green
Journal:  Proc Natl Acad Sci U S A       Date:  2002-08-07       Impact factor: 11.205

10.  Transcriptome-wide analysis of uncapped mRNAs in Arabidopsis reveals regulation of mRNA degradation.

Authors:  Yuling Jiao; José Luis Riechmann; Elliot M Meyerowitz
Journal:  Plant Cell       Date:  2008-10-24       Impact factor: 11.277

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