Literature DB >> 15774720

3D reconstruction of the Mu transposase and the Type 1 transpososome: a structural framework for Mu DNA transposition.

Joy F Yuan1, Daniel R Beniac, George Chaconas, F Peter Ottensmeyer.   

Abstract

Mu DNA transposition proceeds through a series of higher-order nucleoprotein complexes called transpososomes. The structural core of the transpososome is a tetramer of the transposase, Mu A, bound to the two transposon ends. High-resolution structural analysis of the intact transposase and the transpososome has not been successful to date. Here we report the structure of Mu A at 16-angstroms and the Type 1 transpososome at 34-angstroms resolution, by 3D reconstruction of images obtained by scanning transmission electron microscopy (STEM) at cryo-temperatures. Electron spectroscopic imaging (ESI) of the DNA-phosphorus was performed in conjunction with the structural investigation to derive the path of the DNA through the transpososome and to define the DNA-binding surface in the transposase. Our model of the transpososome fits well with the accumulated biochemical literature for this intricate transposition system, and lays a structural foundation for biochemical function, including catalysis in trans and the complex circuit of macromolecular interactions underlying Mu DNA transposition.

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Year:  2005        PMID: 15774720      PMCID: PMC1074321          DOI: 10.1101/gad.1291405

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  49 in total

1.  Sequence and positional requirements for DNA sites in a mu transpososome.

Authors:  Ilana Goldhaber-Gordon; Michael H Early; Matthew K Gray; Tania A Baker
Journal:  J Biol Chem       Date:  2001-12-27       Impact factor: 5.157

2.  DNA recognition sites activate MuA transposase to perform transposition of non-Mu DNA.

Authors:  Ilana Goldhaber-Gordon; Tanya L Williams; Tania A Baker
Journal:  J Biol Chem       Date:  2001-12-27       Impact factor: 5.157

3.  The Mu three-site synapse: a strained assembly platform in which delivery of the L1 transposase binding site triggers catalytic commitment.

Authors:  Kerri Kobryn; Mark A Watson; Ron G Allison; George Chaconas
Journal:  Mol Cell       Date:  2002-09       Impact factor: 17.970

4.  Issues of resolution and polymorphism in single-particle reconstruction.

Authors:  Shixin Yang; Xiong Yu; Vitold E Galkin; Edward H Egelman
Journal:  J Struct Biol       Date:  2003 Oct-Nov       Impact factor: 2.867

5.  Progressive structural transitions within Mu transpositional complexes.

Authors:  Katsuhiko Yanagihara; Kiyoshi Mizuuchi
Journal:  Mol Cell       Date:  2003-01       Impact factor: 17.970

6.  A unique right end-enhancer complex precedes synapsis of Mu ends: the enhancer is sequestered within the transpososome throughout transposition.

Authors:  Shailja Pathania; Makkuni Jayaram; Rasika M Harshey
Journal:  EMBO J       Date:  2003-07-15       Impact factor: 11.598

7.  Reorganization of the Mu transpososome active sites during a cooperative transition between DNA cleavage and joining.

Authors:  Tanya L Williams; Tania A Baker
Journal:  J Biol Chem       Date:  2003-10-29       Impact factor: 5.157

8.  Site-specific recognition of the bacteriophage Mu ends by the Mu A protein.

Authors:  R Craigie; M Mizuuchi; K Mizuuchi
Journal:  Cell       Date:  1984-12       Impact factor: 41.582

9.  In vitro transposition of bacteriophage Mu: a biochemical approach to a novel replication reaction.

Authors:  K Mizuuchi
Journal:  Cell       Date:  1983-12       Impact factor: 41.582

10.  Structure of the human transferrin receptor-transferrin complex.

Authors:  Yifan Cheng; Olga Zak; Philip Aisen; Stephen C Harrison; Thomas Walz
Journal:  Cell       Date:  2004-02-20       Impact factor: 41.582

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  19 in total

1.  Architecture of the 99 bp DNA-six-protein regulatory complex of the lambda att site.

Authors:  Xingmin Sun; Dale F Mierke; Tapan Biswas; Sang Yeol Lee; Arthur Landy; Marta Radman-Livaja
Journal:  Mol Cell       Date:  2006-11-17       Impact factor: 17.970

2.  The dynamic Mu transpososome: MuB activation prevents disintegration.

Authors:  Kathryn M Lemberg; Caterina T H Schweidenback; Tania A Baker
Journal:  J Mol Biol       Date:  2007-10-03       Impact factor: 5.469

3.  Unique contacts direct high-priority recognition of the tetrameric Mu transposase-DNA complex by the AAA+ unfoldase ClpX.

Authors:  Aliaa H Abdelhakim; Elizabeth C Oakes; Robert T Sauer; Tania A Baker
Journal:  Mol Cell       Date:  2008-04-11       Impact factor: 17.970

4.  The AAA+ ClpX machine unfolds a keystone subunit to remodel the Mu transpososome.

Authors:  Aliaa H Abdelhakim; Robert T Sauer; Tania A Baker
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-25       Impact factor: 11.205

5.  Controlling DNA degradation from a distance: a new role for the Mu transposition enhancer.

Authors:  Wonyoung Choi; Rudra P Saha; Sooin Jang; Rasika M Harshey
Journal:  Mol Microbiol       Date:  2014-09-25       Impact factor: 3.501

Review 6.  Transposable Phage Mu.

Authors:  Rasika M Harshey
Journal:  Microbiol Spectr       Date:  2014-10

Review 7.  DDE transposases: Structural similarity and diversity.

Authors:  Irina V Nesmelova; Perry B Hackett
Journal:  Adv Drug Deliv Rev       Date:  2010-07-06       Impact factor: 15.470

8.  Fluorescence resonance energy transfer analysis of recombination signal sequence configuration in the RAG1/2 synaptic complex.

Authors:  Mihai Ciubotaru; Aleksei N Kriatchko; Patrick C Swanson; Frank V Bright; David G Schatz
Journal:  Mol Cell Biol       Date:  2007-04-30       Impact factor: 4.272

9.  A model for the molecular organisation of the IS911 transpososome.

Authors:  Philippe Rousseau; Catherine Tardin; Nathalie Tolou; Laurence Salomé; Mick Chandler
Journal:  Mob DNA       Date:  2010-06-16

Review 10.  The emerging diversity of transpososome architectures.

Authors:  Fred Dyda; Michael Chandler; Alison Burgess Hickman
Journal:  Q Rev Biophys       Date:  2012-11       Impact factor: 5.318

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