Literature DB >> 15767671

Evidence that the elongation factor TFIIS plays a role in transcription initiation at GAL1 in Saccharomyces cerevisiae.

Donald M Prather1, Erica Larschan, Fred Winston.   

Abstract

TFIIS is a transcription elongation factor that has been extensively studied biochemically. Although the in vitro mechanisms by which TFIIS stimulates RNA transcript cleavage and polymerase read-through have been well characterized, its in vivo roles remain unclear. To better understand TFIIS function in vivo, we have examined its role during Gal4-mediated activation of the Saccharomyces cerevisiae GAL1 gene. Surprisingly, TFIIS is strongly associated with the GAL1 upstream activating sequence. In addition, TFIIS recruitment to Gal4-binding sites is dependent on Gal4, SAGA, and Mediator but not on RNA polymerase II (Pol II). The association of TFIIS is also necessary for the optimal recruitment of TATA-binding protein and Pol II to the GAL1 promoter. These results provide strong evidence that TFIIS plays an important role in the initiation of transcription at GAL1 in addition to its well-characterized roles in transcription elongation.

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Year:  2005        PMID: 15767671      PMCID: PMC1061654          DOI: 10.1128/MCB.25.7.2650-2659.2005

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  57 in total

Review 1.  Transcription elongation factor SII.

Authors:  M Wind; D Reines
Journal:  Bioessays       Date:  2000-04       Impact factor: 4.345

2.  Distinct classes of yeast promoters revealed by differential TAF recruitment.

Authors:  X Y Li; S R Bhaumik; M R Green
Journal:  Science       Date:  2000-05-19       Impact factor: 47.728

3.  The chromatin-specific transcription elongation factor FACT comprises human SPT16 and SSRP1 proteins.

Authors:  G Orphanides; W H Wu; W S Lane; M Hampsey; D Reinberg
Journal:  Nature       Date:  1999-07-15       Impact factor: 49.962

4.  TAF-Containing and TAF-independent forms of transcriptionally active TBP in vivo.

Authors:  L Kuras; P Kosa; M Mencia; K Struhl
Journal:  Science       Date:  2000-05-19       Impact factor: 47.728

5.  Genetic interactions between TFIIS and the Swi-Snf chromatin-remodeling complex.

Authors:  J K Davie; C M Kane
Journal:  Mol Cell Biol       Date:  2000-08       Impact factor: 4.272

6.  Saccharomyces cerevisiae transcription elongation mutants are defective in PUR5 induction in response to nucleotide depletion.

Authors:  R J Shaw; D Reines
Journal:  Mol Cell Biol       Date:  2000-10       Impact factor: 4.272

7.  The Saccharomyces cerevisiae Srb8-Srb11 complex functions with the SAGA complex during Gal4-activated transcription.

Authors:  Erica Larschan; Fred Winston
Journal:  Mol Cell Biol       Date:  2005-01       Impact factor: 4.272

Review 8.  Mediator of transcriptional regulation.

Authors:  L C Myers; R D Kornberg
Journal:  Annu Rev Biochem       Date:  2000       Impact factor: 23.643

9.  Synthetic lethal interactions suggest a role for the Saccharomyces cerevisiae Rtf1 protein in transcription elongation.

Authors:  P J Costa; K M Arndt
Journal:  Genetics       Date:  2000-10       Impact factor: 4.562

10.  SPT5, an essential gene important for normal transcription in Saccharomyces cerevisiae, encodes an acidic nuclear protein with a carboxy-terminal repeat.

Authors:  M S Swanson; E A Malone; F Winston
Journal:  Mol Cell Biol       Date:  1991-06       Impact factor: 4.272

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  29 in total

1.  Opposing roles for Set2 and yFACT in regulating TBP binding at promoters.

Authors:  Debabrata Biswas; Rinku Dutta-Biswas; Doyel Mitra; Yoichiro Shibata; Brian D Strahl; Tim Formosa; David J Stillman
Journal:  EMBO J       Date:  2006-09-14       Impact factor: 11.598

2.  Selectivity and proofreading both contribute significantly to the fidelity of RNA polymerase III transcription.

Authors:  Nazif Alic; Nayla Ayoub; Emilie Landrieux; Emmanuel Favry; Peggy Baudouin-Cornu; Michel Riva; Christophe Carles
Journal:  Proc Natl Acad Sci U S A       Date:  2007-06-06       Impact factor: 11.205

3.  The transcription elongation factor TFIIS is a component of RNA polymerase II preinitiation complexes.

Authors:  Bong Kim; Alexey I Nesvizhskii; P Geetha Rani; Steven Hahn; Ruedi Aebersold; Jeffrey A Ranish
Journal:  Proc Natl Acad Sci U S A       Date:  2007-10-03       Impact factor: 11.205

4.  TFIIS elongation factor and Mediator act in conjunction during transcription initiation in vivo.

Authors:  Benjamin Guglielmi; Julie Soutourina; Cyril Esnault; Michel Werner
Journal:  Proc Natl Acad Sci U S A       Date:  2007-09-27       Impact factor: 11.205

5.  Tiny RNAs associated with transcription start sites in animals.

Authors:  Ryan J Taft; Evgeny A Glazov; Nicole Cloonan; Cas Simons; Stuart Stephen; Geoffrey J Faulkner; Timo Lassmann; Alistair R R Forrest; Sean M Grimmond; Kate Schroder; Katharine Irvine; Takahiro Arakawa; Mari Nakamura; Atsutaka Kubosaki; Kengo Hayashida; Chika Kawazu; Mitsuyoshi Murata; Hiromi Nishiyori; Shiro Fukuda; Jun Kawai; Carsten O Daub; David A Hume; Harukazu Suzuki; Valerio Orlando; Piero Carninci; Yoshihide Hayashizaki; John S Mattick
Journal:  Nat Genet       Date:  2009-04-19       Impact factor: 38.330

6.  Genome-wide location analysis reveals a role of TFIIS in RNA polymerase III transcription.

Authors:  Yad Ghavi-Helm; Magali Michaut; Joël Acker; Jean-Christophe Aude; Pierre Thuriaux; Michel Werner; Julie Soutourina
Journal:  Genes Dev       Date:  2008-07-15       Impact factor: 11.361

7.  Chromatin potentiates transcription.

Authors:  Shigeki Nagai; Ralph E Davis; Pierre Jean Mattei; Kyle Patrick Eagen; Roger D Kornberg
Journal:  Proc Natl Acad Sci U S A       Date:  2017-01-30       Impact factor: 11.205

8.  Transcription factors TFIIF and TFIIS promote transcript elongation by RNA polymerase II by synergistic and independent mechanisms.

Authors:  Volker Schweikhard; Cong Meng; Kenji Murakami; Craig D Kaplan; Roger D Kornberg; Steven M Block
Journal:  Proc Natl Acad Sci U S A       Date:  2014-04-14       Impact factor: 11.205

9.  The structure of an Iws1/Spt6 complex reveals an interaction domain conserved in TFIIS, Elongin A and Med26.

Authors:  Marie-Laure Diebold; Michael Koch; Erin Loeliger; Vincent Cura; Fred Winston; Jean Cavarelli; Christophe Romier
Journal:  EMBO J       Date:  2010-11-05       Impact factor: 11.598

10.  Transcription elongation factor S-II is required for definitive hematopoiesis.

Authors:  Takahiro Ito; Nagisa Arimitsu; Masaki Takeuchi; Nobuyuki Kawamura; Makiko Nagata; Kayoko Saso; Nobuyoshi Akimitsu; Hiroshi Hamamoto; Shunji Natori; Atsushi Miyajima; Kazuhisa Sekimizu
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

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