Literature DB >> 15601835

The Saccharomyces cerevisiae Srb8-Srb11 complex functions with the SAGA complex during Gal4-activated transcription.

Erica Larschan1, Fred Winston.   

Abstract

The Saccharomyces cerevisiae SAGA (Spt-Ada-Gcn5-acetyltransferase) complex functions as a coactivator during Gal4-activated transcription. A functional interaction between the SAGA component Spt3 and TATA-binding protein (TBP) is important for TBP binding at Gal4-activated promoters. To better understand the role of SAGA and other factors in Gal4-activated transcription, we selected for suppressors that bypass the requirement for SAGA. We obtained eight complementation groups and identified the genes corresponding to three of the groups as NHP10, HDA1, and SRB9. In contrast to the srb9 suppressor mutation that we identified, an srb9Delta mutation causes a strong defect in Gal4-activated transcription. Our studies have focused on this requirement for Srb9. Srb9 is part of the Srb8-Srb11 complex, associated with the Mediator coactivator. Srb8-Srb11 contains the Srb10 kinase, whose activity is important for GAL1 transcription. Our data suggest that Srb8-Srb11, including Srb10 kinase activity, is directly involved in Gal4 activation. By chromatin immunoprecipitation studies, Srb9 is present at the GAL1 promoter upon induction and facilitates the recruitment or stable association of TBP. Furthermore, the association of Srb9 with the GAL1 upstream activation sequence requires SAGA and specifically Spt3. Finally, Srb9 association also requires TBP. These results suggest that Srb8-Srb11 associates with the GAL1 promoter subsequent to SAGA binding, and that the binding of TBP and Srb8-Srb11 is interdependent.

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Year:  2005        PMID: 15601835      PMCID: PMC538787          DOI: 10.1128/MCB.25.1.114-123.2005

Source DB:  PubMed          Journal:  Mol Cell Biol        ISSN: 0270-7306            Impact factor:   4.272


  62 in total

1.  Distinct classes of yeast promoters revealed by differential TAF recruitment.

Authors:  X Y Li; S R Bhaumik; M R Green
Journal:  Science       Date:  2000-05-19       Impact factor: 47.728

2.  In vivo requirement of activator-specific binding targets of mediator.

Authors:  J M Park; H S Kim; S J Han; M S Hwang; Y C Lee; Y J Kim
Journal:  Mol Cell Biol       Date:  2000-12       Impact factor: 4.272

Review 3.  Cooperation between complexes that regulate chromatin structure and transcription.

Authors:  Geeta J Narlikar; Hua-Ying Fan; Robert E Kingston
Journal:  Cell       Date:  2002-02-22       Impact factor: 41.582

4.  SAGA is an essential in vivo target of the yeast acidic activator Gal4p.

Authors:  S R Bhaumik; M R Green
Journal:  Genes Dev       Date:  2001-08-01       Impact factor: 11.361

Review 5.  Transcriptional coactivator complexes.

Authors:  A M Näär; B D Lemon; R Tjian
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

Review 6.  Histone acetyltransferases.

Authors:  S Y Roth; J M Denu; C D Allis
Journal:  Annu Rev Biochem       Date:  2001       Impact factor: 23.643

7.  Cti6, a PHD domain protein, bridges the Cyc8-Tup1 corepressor and the SAGA coactivator to overcome repression at GAL1.

Authors:  Manolis Papamichos-Chronakis; Theodoros Petrakis; Eleni Ktistaki; Irini Topalidou; Dimitris Tzamarias
Journal:  Mol Cell       Date:  2002-06       Impact factor: 17.970

8.  The S. cerevisiae SAGA complex functions in vivo as a coactivator for transcriptional activation by Gal4.

Authors:  E Larschan; F Winston
Journal:  Genes Dev       Date:  2001-08-01       Impact factor: 11.361

9.  Negative regulation of Gcn4 and Msn2 transcription factors by Srb10 cyclin-dependent kinase.

Authors:  Y Chi; M J Huddleston; X Zhang; R A Young; R S Annan; S A Carr; R J Deshaies
Journal:  Genes Dev       Date:  2001-05-01       Impact factor: 11.361

10.  Analysis of Spt7 function in the Saccharomyces cerevisiae SAGA coactivator complex.

Authors:  Pei-Yun Jenny Wu; Fred Winston
Journal:  Mol Cell Biol       Date:  2002-08       Impact factor: 4.272

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  38 in total

Review 1.  Inducible gene expression: diverse regulatory mechanisms.

Authors:  Vikki M Weake; Jerry L Workman
Journal:  Nat Rev Genet       Date:  2010-04-27       Impact factor: 53.242

2.  TFIID and Spt-Ada-Gcn5-acetyltransferase functions probed by genome-wide synthetic genetic array analysis using a Saccharomyces cerevisiae taf9-ts allele.

Authors:  Elena Milgrom; Robert W West; Chen Gao; W-C Winston Shen
Journal:  Genetics       Date:  2005-08-22       Impact factor: 4.562

3.  Evidence that the elongation factor TFIIS plays a role in transcription initiation at GAL1 in Saccharomyces cerevisiae.

Authors:  Donald M Prather; Erica Larschan; Fred Winston
Journal:  Mol Cell Biol       Date:  2005-04       Impact factor: 4.272

4.  Transcriptional activating regions target attached substrates to a cyclin-dependent kinase.

Authors:  Aseem Z Ansari; Anuja Ogirala; Mark Ptashne
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-01       Impact factor: 11.205

5.  Independent recruitment of mediator and SAGA by the activator Met4.

Authors:  Christophe Leroy; Laëtitia Cormier; Laurent Kuras
Journal:  Mol Cell Biol       Date:  2006-04       Impact factor: 4.272

Review 6.  RNA polymerase II C-terminal domain: Tethering transcription to transcript and template.

Authors:  Jeffry L Corden
Journal:  Chem Rev       Date:  2013-09-16       Impact factor: 60.622

7.  Kinetic analysis of acetylation-dependent Pb1 bromodomain-histone interactions.

Authors:  Christopher Kupitz; Renu Chandrasekaran; Martin Thompson
Journal:  Biophys Chem       Date:  2008-04-04       Impact factor: 2.352

8.  Pygopus activates Wingless target gene transcription through the mediator complex subunits Med12 and Med13.

Authors:  Inés Carrera; Florence Janody; Nina Leeds; Fabien Duveau; Jessica E Treisman
Journal:  Proc Natl Acad Sci U S A       Date:  2008-05-01       Impact factor: 11.205

9.  Cooperative activity of cdk8 and GCN5L within Mediator directs tandem phosphoacetylation of histone H3.

Authors:  Krista D Meyer; Aaron J Donner; Matthew T Knuesel; Autumn G York; Joaquín M Espinosa; Dylan J Taatjes
Journal:  EMBO J       Date:  2008-04-17       Impact factor: 11.598

10.  Analysis of Polygenic Mutants Suggests a Role for Mediator in Regulating Transcriptional Activation Distance in Saccharomyces cerevisiae.

Authors:  Caitlin T Reavey; Mark J Hickman; Krista C Dobi; David Botstein; Fred Winston
Journal:  Genetics       Date:  2015-08-17       Impact factor: 4.562

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