Literature DB >> 15713082

On the catalytic mechanism of choline oxidase.

Fan Fan1, Giovanni Gadda.   

Abstract

Choline oxidase catalyzes the four-electron oxidation of choline to glycine betaine, with betaine aldehyde as an intermediate. In this study, primary deuterium and solvent kinetic isotope effects have been used to elucidate the mechanism for substrate oxidation by choline oxidase using both steady-state kinetics and rapid kinetics techniques. The D(kcat/Km) value with 1,2-[2H4]-choline at saturating oxygen concentration was independent of pH in the range between 6.5 and 10, with a value of approximately 10.6, indicating that CH bond cleavage is not masked by other titratable kinetic steps belonging to the reductive half-reaction. In agreement with this conclusion, a Dkred value of approximately 8.9 was determined at pH 10 for the anaerobic reduction of the flavin by choline, irrespective of whether aqueous or deuterated solvent was used. At pH 10, both the D2(O)(kcat/Km) and the D2(O)kred values were not different from unity with choline or 1,2-[2H4]-choline, while the Dkcat and D2(O)kcat values were 7.3 and 1.1, respectively. The kcat and kred values were 133 s(-1) and 135 s(-1) with betaine aldehyde and 60 s(-1) and 93 s(-1) with choline. These data are consistent with a chemical mechanism in which the choline hydroxyl proton is not in flight in the transition state for CH bond cleavage and with chemical steps of flavin reduction by choline and betaine aldehyde being rate limiting for the overall turnover of the enzyme.

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Year:  2005        PMID: 15713082     DOI: 10.1021/ja044541q

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  22 in total

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2.  pH and kinetic isotope effects on sarcosine oxidation by N-methyltryptophan oxidase.

Authors:  Erik C Ralph; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2005-03-01       Impact factor: 3.162

3.  Mechanistic Characterization of Escherichia coli l-Aspartate Oxidase from Kinetic Isotope Effects.

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Journal:  Biochemistry       Date:  2017-07-26       Impact factor: 3.162

4.  Kinetic and isotopic characterization of L-proline dehydrogenase from Mycobacterium tuberculosis.

Authors:  Hector Serrano; John S Blanchard
Journal:  Biochemistry       Date:  2013-07-08       Impact factor: 3.162

Review 5.  Combining solvent isotope effects with substrate isotope effects in mechanistic studies of alcohol and amine oxidation by enzymes.

Authors:  Paul F Fitzpatrick
Journal:  Biochim Biophys Acta       Date:  2014-10-30

6.  [18F]fluoromethyl-[1,2-2H4]-choline: a novel radiotracer for imaging choline metabolism in tumors by positron emission tomography.

Authors:  Julius Leyton; Graham Smith; Yongjun Zhao; Meg Perumal; Quang-De Nguyen; Edward Robins; Erik Arstad; Eric O Aboagye
Journal:  Cancer Res       Date:  2009-09-22       Impact factor: 12.701

7.  Aryl-alcohol oxidase involved in lignin degradation: a mechanistic study based on steady and pre-steady state kinetics and primary and solvent isotope effects with two alcohol substrates.

Authors:  Patricia Ferreira; Aitor Hernandez-Ortega; Beatriz Herguedas; Angel T Martínez; Milagros Medina
Journal:  J Biol Chem       Date:  2009-07-02       Impact factor: 5.157

8.  Involvement of ionizable groups in catalysis of human liver glycolate oxidase.

Authors:  Andrea Pennati; Giovanni Gadda
Journal:  J Biol Chem       Date:  2009-09-16       Impact factor: 5.157

9.  Crystallographic, spectroscopic, and computational analysis of a flavin C4a-oxygen adduct in choline oxidase.

Authors:  Allen M Orville; George T Lountos; Steffan Finnegan; Giovanni Gadda; Rajeev Prabhakar
Journal:  Biochemistry       Date:  2009-02-03       Impact factor: 3.162

Review 10.  Oxidation of amines by flavoproteins.

Authors:  Paul F Fitzpatrick
Journal:  Arch Biochem Biophys       Date:  2009-08-03       Impact factor: 4.013

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