Literature DB >> 19574215

Aryl-alcohol oxidase involved in lignin degradation: a mechanistic study based on steady and pre-steady state kinetics and primary and solvent isotope effects with two alcohol substrates.

Patricia Ferreira1, Aitor Hernandez-Ortega, Beatriz Herguedas, Angel T Martínez, Milagros Medina.   

Abstract

Aryl-alcohol oxidase (AAO) is a FAD-containing enzyme in the GMC (glucose-methanol-choline oxidase) family of oxidoreductases. AAO participates in fungal degradation of lignin, a process of high ecological and biotechnological relevance, by providing the hydrogen peroxide required by ligninolytic peroxidases. In the Pleurotus species, this peroxide is generated in the redox cycling of p-anisaldehyde, an extracellular fungal metabolite. In addition to p-anisyl alcohol, the enzyme also oxidizes other polyunsaturated primary alcohols. Its reaction mechanism was investigated here using p-anisyl alcohol and 2,4-hexadien-1-ol as two AAO model substrates. Steady state kinetic parameters and enzyme-monitored turnover were consistent with a sequential mechanism in which O(2) reacts with reduced AAO before release of the aldehyde product. Pre-steady state analysis revealed that the AAO reductive half-reaction is essentially irreversible and rate limiting during catalysis. Substrate and solvent kinetic isotope effects under steady and pre-steady state conditions (the latter showing approximately 9-fold slower enzyme reduction when alpha-bideuterated substrates were used, and approximately 13-fold slower reduction when both substrate and solvent effects were simultaneously evaluated) revealed a synchronous mechanism in which hydride transfer from substrate alpha-carbon to FAD and proton abstraction from hydroxyl occur simultaneously. This significantly differs from the general mechanism proposed for other members of the GMC oxidoreductase family that implies hydride transfer from a previously stabilized substrate alkoxide.

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Year:  2009        PMID: 19574215      PMCID: PMC2757187          DOI: 10.1074/jbc.M109.011593

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  41 in total

1.  Molecular cloning of aryl-alcohol oxidase from the fungus Pleurotus eryngii, an enzyme involved in lignin degradation.

Authors:  E Varela; A T Martínez; M J Martínez
Journal:  Biochem J       Date:  1999-07-01       Impact factor: 3.857

2.  Aryl-alcohol oxidase protein sequence: a comparison with glucose oxidase and other FAD oxidoreductases.

Authors:  E Varela; M Jesús Martínez; A T Martínez
Journal:  Biochim Biophys Acta       Date:  2000-08-31

3.  Conserved arginine-516 of Penicillium amagasakiense glucose oxidase is essential for the efficient binding of beta-D-glucose.

Authors:  S Witt; G Wohlfahrt; D Schomburg; H J Hecht; H M Kalisz
Journal:  Biochem J       Date:  2000-04-15       Impact factor: 3.857

4.  On the catalytic role of the conserved active site residue His466 of choline oxidase.

Authors:  Mahmoud Ghanem; Giovanni Gadda
Journal:  Biochemistry       Date:  2005-01-25       Impact factor: 3.162

5.  Catalytic mechanism of the oxidative demethylation of 4-(methoxymethyl)phenol by vanillyl-alcohol oxidase. Evidence for formation of a p-quinone methide intermediate.

Authors:  M W Fraaije; W J van Berkel
Journal:  J Biol Chem       Date:  1997-07-18       Impact factor: 5.157

Review 6.  Introduction: flavoprotein structure and mechanism.

Authors:  V Massey
Journal:  FASEB J       Date:  1995-04       Impact factor: 5.191

7.  The use of isotope effects to determine transition-state structure for enzymic reactions.

Authors:  W W Cleland
Journal:  Methods Enzymol       Date:  1982       Impact factor: 1.600

8.  The oxidation of 1-deuterated glucose by glucose oxidase.

Authors:  H J Bright; Q H Gibson
Journal:  J Biol Chem       Date:  1967-03-10       Impact factor: 5.157

Review 9.  Hydride transfer made easy in the reaction of alcohol oxidation catalyzed by flavin-dependent oxidases.

Authors:  Giovanni Gadda
Journal:  Biochemistry       Date:  2008-12-30       Impact factor: 3.162

10.  Catalysis of electron transfer during activation of O2 by the flavoprotein glucose oxidase.

Authors:  Justine P Roth; Judith P Klinman
Journal:  Proc Natl Acad Sci U S A       Date:  2002-12-27       Impact factor: 11.205

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  12 in total

1.  Modulating O2 reactivity in a fungal flavoenzyme: involvement of aryl-alcohol oxidase Phe-501 contiguous to catalytic histidine.

Authors:  Aitor Hernández-Ortega; Fátima Lucas; Patricia Ferreira; Milagros Medina; Victor Guallar; Angel T Martínez
Journal:  J Biol Chem       Date:  2011-09-22       Impact factor: 5.157

Review 2.  Combining solvent isotope effects with substrate isotope effects in mechanistic studies of alcohol and amine oxidation by enzymes.

Authors:  Paul F Fitzpatrick
Journal:  Biochim Biophys Acta       Date:  2014-10-30

3.  Focused Directed Evolution of Aryl-Alcohol Oxidase in Saccharomyces cerevisiae by Using Chimeric Signal Peptides.

Authors:  Javier Viña-Gonzalez; David Gonzalez-Perez; Patricia Ferreira; Angel T Martinez; Miguel Alcalde
Journal:  Appl Environ Microbiol       Date:  2015-07-10       Impact factor: 4.792

4.  Fungal and host transcriptome analysis of pH-regulated genes during colonization of apple fruits by Penicillium expansum.

Authors:  Shiri Barad; Noa Sela; Dilip Kumar; Amit Kumar-Dubey; Nofar Glam-Matana; Amir Sherman; Dov Prusky
Journal:  BMC Genomics       Date:  2016-05-04       Impact factor: 3.969

5.  Molecular characterization and expression of a novel alcohol oxidase from Aspergillus terreus MTCC6324.

Authors:  Mitun Chakraborty; Manish Goel; Somasekhar R Chinnadayyala; Ujjwal Ranjan Dahiya; Siddhartha Sankar Ghosh; Pranab Goswami
Journal:  PLoS One       Date:  2014-04-21       Impact factor: 3.240

6.  Identification of the Genes Involved in the Fruiting Body Production and Cordycepin Formation of Cordyceps militaris Fungus.

Authors:  Zhuang-Li Zheng; Xue-Hong Qiu; Ri-Chou Han
Journal:  Mycobiology       Date:  2015-03-31       Impact factor: 1.858

7.  Penicillium echinulatum secretome analysis reveals the fungi potential for degradation of lignocellulosic biomass.

Authors:  Willian Daniel Hahn Schneider; Thiago Augusto Gonçalves; Cristiane Akemi Uchima; Matthew Brian Couger; Rolf Prade; Fabio Marcio Squina; Aldo José Pinheiro Dillon; Marli Camassola
Journal:  Biotechnol Biofuels       Date:  2016-03-17       Impact factor: 6.040

8.  Multiple implications of an active site phenylalanine in the catalysis of aryl-alcohol oxidase.

Authors:  Juan Carro; Pep Amengual-Rigo; Ferran Sancho; Milagros Medina; Victor Guallar; Patricia Ferreira; Angel T Martínez
Journal:  Sci Rep       Date:  2018-05-25       Impact factor: 4.379

9.  GmcA is a putative glucose-methanol-choline oxidoreductase required for the induction of asexual development in Aspergillus nidulans.

Authors:  Oier Etxebeste; Erika Herrero-García; Marc S Cortese; Aitor Garzia; Elixabet Oiartzabal-Arano; Vivian de los Ríos; Unai Ugalde; Eduardo A Espeso
Journal:  PLoS One       Date:  2012-07-05       Impact factor: 3.240

10.  Genome and secretome analysis of the hemibiotrophic fungal pathogen, Moniliophthora roreri, which causes frosty pod rot disease of cacao: mechanisms of the biotrophic and necrotrophic phases.

Authors:  Lyndel W Meinhardt; Gustavo Gilson Lacerda Costa; Daniela P T Thomazella; Paulo José P L Teixeira; Marcelo Falsarella Carazzolle; Stephan C Schuster; John E Carlson; Mark J Guiltinan; Piotr Mieczkowski; Andrew Farmer; Thiruvarangan Ramaraj; Jayne Crozier; Robert E Davis; Jonathan Shao; Rachel L Melnick; Gonçalo A G Pereira; Bryan A Bailey
Journal:  BMC Genomics       Date:  2014-02-27       Impact factor: 3.969

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