Literature DB >> 15713081

Establishing the kinetic competency of the cationic imine intermediate in nitroalkane oxidase.

Michael P Valley1, Shane E Tichy, Paul F Fitzpatrick.   

Abstract

The flavoprotein nitroalkane oxidase catalyzes the oxidation of neutral nitroalkanes to the corresponding aldehydes and ketones. Cyanide inactivates the enzyme during turnover in a concentration-dependent fashion. Mass spectrometry of the flavin from enzyme inactivated by cyanide in the presence of nitroethane or nitrohexane shows that a flavin cyanoethyl or cyanohexyl intermediate has formed. At high concentrations of cyanide, inactivation does not consume oxygen. Rapid reaction studies show that formation of the adduct with 2-(2H2)-nitroethane shows a kinetic isotope effect of 7.9. These results are consistent with cyanide reacting with a species formed after proton abstraction but before flavin oxidation. The proposed mechanism for nitroalkane oxidase involves removal of a proton from the nitroalkane, forming a carbanion which adds to the flavin N(5). Elimination of nitrite from the resulting adduct would form an electrophilic imine which can be attacked by hydroxide. The present results are consistent with cyanide trapping this electrophilic intermediate.

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Year:  2005        PMID: 15713081      PMCID: PMC1630679          DOI: 10.1021/ja043542f

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  14 in total

1.  Biochemical and physical characterization of the active FAD-containing form of nitroalkane oxidase from Fusarium oxysporum.

Authors:  G Gadda; P F Fitzpatrick
Journal:  Biochemistry       Date:  1998-04-28       Impact factor: 3.162

2.  Mechanism of nitroalkane oxidase: 2. pH and kinetic isotope effects.

Authors:  G Gadda; P F Fitzpatrick
Journal:  Biochemistry       Date:  2000-02-15       Impact factor: 3.162

3.  Nitroalkanes as reductive substrates for flavoprotein oxidases.

Authors:  D J Porter; J G Voet; H J Bright
Journal:  Z Naturforsch B       Date:  1972-09       Impact factor: 1.047

4.  Direct evidence for carbanions and covalent N 5 -flavin-carbanion adducts as catalytic intermediates in the oxidation of nitroethane by D-amino acid oxidase.

Authors:  D J Porter; J G Voet; H J Bright
Journal:  J Biol Chem       Date:  1973-06-25       Impact factor: 5.157

5.  Use of pH and kinetic isotope effects to dissect the effects of substrate size on binding and catalysis by nitroalkane oxidase.

Authors:  G Gadda; D Y Choe; P F Fitzpatrick
Journal:  Arch Biochem Biophys       Date:  2000-10-01       Impact factor: 4.013

6.  Cloning of nitroalkane oxidase from Fusarium oxysporum identifies a new member of the acyl-CoA dehydrogenase superfamily.

Authors:  S Colette Daubner; Giovanni Gadda; Michael P Valley; Paul F Fitzpatrick
Journal:  Proc Natl Acad Sci U S A       Date:  2002-02-26       Impact factor: 11.205

Review 7.  Nitroalkane oxidase, a carbanion-forming flavoprotein homologous to acyl-CoA dehydrogenase.

Authors:  Paul F Fitzpatrick; Allen M Orville; Akanksha Nagpal; Michael P Valley
Journal:  Arch Biochem Biophys       Date:  2005-01-01       Impact factor: 4.013

8.  Inactivation of nitroalkane oxidase upon mutation of the active site base and rescue with a deprotonated substrate.

Authors:  Michael P Valley; Paul F Fitzpatrick
Journal:  J Am Chem Soc       Date:  2003-07-23       Impact factor: 15.419

Review 9.  Carbanion versus hydride transfer mechanisms in flavoprotein-catalyzed dehydrogenations.

Authors:  Paul F Fitzpatrick
Journal:  Bioorg Chem       Date:  2004-06       Impact factor: 5.275

10.  Reductive half-reaction of nitroalkane oxidase: effect of mutation of the active site aspartate to glutamate.

Authors:  Michael P Valley; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2003-05-20       Impact factor: 3.162

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  15 in total

1.  Crystal structures of nitroalkane oxidase: insights into the reaction mechanism from a covalent complex of the flavoenzyme trapped during turnover.

Authors:  Akanksha Nagpal; Michael P Valley; Paul F Fitzpatrick; Allen M Orville
Journal:  Biochemistry       Date:  2006-01-31       Impact factor: 3.162

2.  Crystal structures of intermediates in the nitroalkane oxidase reaction.

Authors:  Annie Héroux; Dragana M Bozinovski; Michael P Valley; Paul F Fitzpatrick; Allen M Orville
Journal:  Biochemistry       Date:  2009-04-21       Impact factor: 3.162

3.  Differential quantum tunneling contributions in nitroalkane oxidase catalyzed and the uncatalyzed proton transfer reaction.

Authors:  Dan T Major; Annie Heroux; Allen M Orville; Michael P Valley; Paul F Fitzpatrick; Jiali Gao
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-19       Impact factor: 11.205

Review 4.  Nitroalkane oxidase: Structure and mechanism.

Authors:  Paul F Fitzpatrick
Journal:  Arch Biochem Biophys       Date:  2017-05-18       Impact factor: 4.013

5.  Precursor of ether phospholipids is synthesized by a flavoenzyme through covalent catalysis.

Authors:  Simone Nenci; Valentina Piano; Sara Rosati; Alessandro Aliverti; Vittorio Pandini; Marco W Fraaije; Albert J R Heck; Dale E Edmondson; Andrea Mattevi
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-29       Impact factor: 11.205

6.  Enzymatic Kinetic Isotope Effects from Path-Integral Free Energy Perturbation Theory.

Authors:  J Gao
Journal:  Methods Enzymol       Date:  2016-07-22       Impact factor: 1.600

7.  Identification of a hypothetical protein from Podospora anserina as a nitroalkane oxidase.

Authors:  José R Tormos; Alexander B Taylor; S Colette Daubner; P John Hart; Paul F Fitzpatrick
Journal:  Biochemistry       Date:  2010-06-22       Impact factor: 3.162

8.  Species differences in the selective inhibition of monoamine oxidase (1-methyl-2-phenylethyl)hydrazine and its potentiation by cyanide.

Authors:  Zakia Ben Ramadan; Maria L Wrang; Keith F Tipton
Journal:  Neurochem Res       Date:  2007-04-03       Impact factor: 3.996

9.  Mechanistic and structural analyses of the roles of Arg409 and Asp402 in the reaction of the flavoprotein nitroalkane oxidase.

Authors:  Paul F Fitzpatrick; Dragana M Bozinovski; Annie Héroux; Patrick G Shaw; Michael P Valley; Allen M Orville
Journal:  Biochemistry       Date:  2007-11-10       Impact factor: 3.162

10.  Characterization of active site residues of nitroalkane oxidase.

Authors:  Michael P Valley; Nana S Fenny; Shah R Ali; Paul F Fitzpatrick
Journal:  Bioorg Chem       Date:  2009-12-28       Impact factor: 5.275

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